DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)gd1 and CC2D1B

DIOPT Version :9

Sequence 1:NP_001245976.1 Gene:l(2)gd1 / 34543 FlyBaseID:FBgn0261983 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_115825.1 Gene:CC2D1B / 200014 HGNCID:29386 Length:858 Species:Homo sapiens


Alignment Length:931 Identity:308/931 - (33%)
Similarity:483/931 - (51%) Gaps:185/931 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RKKPEP-----AKRRQHDL-SQFGLTEIPDDFDPSAGYGEDDGGDSDLEAELAAITG---GEGAK 59
            ||.|:.     |..:|..| .:||    |:|........||   |.||||||.|:||   ..|.|
Human     8 RKGPQARGQGVAAAKQMGLFMEFG----PEDMLLGMDEAED---DEDLEAELLALTGEAQTTGKK 65

  Fly    60 PKPKPKAKLLPASDLDKMIADSLRDVSDDDDDDNLESDPDLLGELSGIGGLEEAEEEEP-----V 119
            |.||.:|. ||.:.::|:.||.:|||.::::::.||.|.:||.||..:.|::  ||.||     |
Human    66 PAPKGQAP-LPMAHIEKLAADCMRDVEEEEEEEGLEEDAELLTELQEVLGVD--EETEPLDGDEV 127

  Fly   120 AQPPAASEE--------PVQTFLPTTTVDTL---------SIIKQRLEMYKQAEANAKTAGDSGK 167
            |.|..:.||        ||||.:.|.:....         :::::|:..|::|.|:||.||::.|
Human   128 ADPGGSEEENGLEDTEPPVQTAVLTASAPAAQAGASQGLHALLEERIHNYREAAASAKEAGEAAK 192

  Fly   168 ARRFGRGLKTLKDLHRQAAAGKSINVDDIPPEVSVKPIGGQAPPVPAEESPAPSTPASPPPVPSR 232
            |||..||||||:........|:.||.|:|||.|::    |:.|..|.|  ||..:|.:.||.|..
Human   193 ARRCERGLKTLESQLASVRRGRKINEDEIPPPVAL----GKRPLAPQE--PANRSPETDPPAPPA 251

  Fly   233 AAPDPPT------PGTPVEPTTSVAPTSPPNPLVTQMRSRQTDYKAAALQSKRSGDISTALQFLK 291
            ...|.|:      ||...:|.:.:.|  .|..|::   |||.:||.|||.:||:|::..|.:.::
Human   252 LESDNPSQPETSLPGISAQPVSDLDP--DPRALLS---SRQREYKVAALSAKRAGELDRARELMR 311

  Fly   292 VVKQFDVVIKMCEDGQEVDLSDMPPPPAEFLEFLKKMQEEAAAEAVA---------EPTAAPE-- 345
            :.|:|..|::..|.||.||||.|||.|    |.||..|...|..|.:         :|..||:  
Human   312 IGKRFGAVLEALEKGQPVDLSAMPPAP----EDLKPQQASQAPTAPSVIPPAVERVQPVMAPDVP 372

  Fly   346 PTPVAPAPVLAAATNMLEALQQRLEKYQSVEAAAKAENNSGKARRFGRIVKQYEDAIKLYKAGKP 410
            .|||||    ..:..:|:||||||.||:.....|::..:..|||...||.|||:|||:.::||:.
Human   373 ATPVAP----TESQTVLDALQQRLNKYREAGIQARSGGDERKARMHERIAKQYQDAIRAHRAGRK 433

  Fly   411 VPYDELPVPPGFGPLPTADA--------------------------------------------- 430
            |.:.||||||||.|:|..::                                             
Human   434 VNFAELPVPPGFPPIPGLESTMGVEEDAVAATLAAAEKLASAEDSAPADKDEDEPPGHLQGEPPA 498

  Fly   431 -APVAPTPSLPTSPTS---PPPTASTSAGGTPSSSSATTPTAPRKAPSPPKPKELTTRTSGNQQK 491
             ||||..|:.||.|:|   |.|.||:|                :::|||.               
Human   499 QAPVAKKPARPTVPSSQRLPEPRASSS----------------KESPSPS--------------- 532

  Fly   492 NNIAEQQMKLLLERQKEFKLAAIEAKKAGEIDQAKEYLKIFKGFDSLLNAASSGLPVDLSTLPVP 556
               ..:|:.||..|:.:::.||::||::.:::|||.||::.|..::.:..|.||.|||||.:|.|
Human   533 ---VREQLALLEARKLQYQRAALQAKRSQDLEQAKAYLRVAKWLEAQIIQARSGRPVDLSKVPSP 594

  Fly   557 PSQRDNLEASFAIVSAEECDPTDDICEIGVRMEEQLAKQLMMCKNTRDHHKAMGDVAGMNRFENL 621
            .:..   |..|.::..|:...:....|:..::::.|.:|...|..........|:||...|||.|
Human   595 LTDE---EGDFILIHHEDLRLSQKAEEVYAQLQKMLLEQQEKCLLFSKQFMHQGNVAETTRFEKL 656

  Fly   622 ALTVQKDLDLVRYSKRKNEPLPKFHYEKRSFNIVHCNTDLTDSELEIVVVRGISYNV---ANPKD 683
            |...:|.|::::.::.:....|..|:|.::|..|...::|..:|:.:::|||::...   ..|.|
Human   657 AQDRKKQLEILQLAQAQGLDPPTHHFELKTFQTVRIFSELNSTEMHLIIVRGMNLPAPPGVTPDD 721

  Fly   684 VDTYVRVEFPLLN-DESFKTKTNVIRDTSSPDYDERFKVDIQRTNRQFQRIFKRHGVKFEIYSRG 747
            :|.:||.||...| |::.|:||.|:::|:||::|:.||::|.|.:|.|:|:.:..|:||||:.:|
Human   722 LDAFVRFEFHYPNSDQAQKSKTAVVKNTNSPEFDQLFKLNINRNHRGFKRVIQSKGIKFEIFHKG 786

  Fly   748 CSIDCCGLSRKLPLCCFRGFLRSDTLIGTVNVKLQPLETKCEIHDTYDLMDGRKQVGGKLEVKIR 812
                              .|.|||.|:||.::||:.||.:|||.:..:::||||..|||||||:|
Human   787 ------------------SFFRSDKLVGTAHLKLERLENECEIREIVEVLDGRKPTGGKLEVKVR 833

  Fly   813 VRNPILTKQMEHITEKWLVLD 833
            :|.|:..:.::.:||.||||:
Human   834 LREPLSGQDVQMVTENWLVLE 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)gd1NP_001245976.1 DM14 142..200 CDD:128928 25/66 (38%)
DM14 260..318 CDD:128928 25/57 (44%)
DM14 362..420 CDD:128928 28/57 (49%)
DM14 499..557 CDD:128928 22/57 (39%)
C2_Freud-1 661..832 CDD:176072 67/174 (39%)
CC2D1BNP_115825.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..164 15/53 (28%)
DM14 168..225 CDD:128928 25/56 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..199 10/18 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..284 26/87 (30%)
DM14 281..338 CDD:128928 26/59 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 329..352 13/26 (50%)
DM14 385..439 CDD:128928 24/53 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 470..533 17/96 (18%)
DM14 537..594 CDD:128928 22/56 (39%)
C2_Freud-1 696..853 CDD:176072 67/174 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158221
Domainoid 1 1.000 326 1.000 Domainoid score I1184
eggNOG 1 0.900 - - E1_KOG3837
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 470 1.000 Inparanoid score I1526
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49459
OrthoDB 1 1.010 - - D408012at33208
OrthoFinder 1 1.000 - - FOG0003388
OrthoInspector 1 1.000 - - otm41354
orthoMCL 1 0.900 - - OOG6_104069
Panther 1 1.100 - - O PTHR13076
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2281
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.770

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