DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reps and END3

DIOPT Version :10

Sequence 1:NP_609487.2 Gene:Reps / 34542 FlyBaseID:FBgn0032341 Length:907 Species:Drosophila melanogaster
Sequence 2:NP_014315.1 Gene:END3 / 855640 SGDID:S000005028 Length:349 Species:Saccharomyces cerevisiae


Alignment Length:289 Identity:63/289 - (21%)
Similarity:97/289 - (33%) Gaps:93/289 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 SRIPVEELRHIWQLCDVTRDGALSLSEFTAAMHLV--VLRRNNIPLPTSLPHCLHPNVLQAAASG 359
            |::....|..||.|.|:..|..|...||...|.|:  ::.:|...:|..||..|.|        |
Yeast    38 SKLDSSVLNKIWFLADIDDDDNLDFEEFVICMRLIFDMVNKNISSVPDELPDWLIP--------G 94

  Fly   360 SGQGVTSSSSAALPQE----PPEADL---LHLNDDDEDDH----------TDNTIIAGNLSGSST 407
            |...:..........|    ||:.::   .:::.||.:.:          ||.||....||...:
Yeast    95 SKVNLIKERKKRKQIENADLPPKKEIKVDWYMSPDDLNQYEKIYNSCAKLTDGTITFNELSTKLS 159

  Fly   408 TS----------------KPRPNVPS-DKN-----------------------------IMNLSS 426
            |.                .|: |:|| |::                             :.|...
Yeast   160 TKFFNISKTDLNKVWSLINPQ-NLPSIDRDPTFYFIHCLRQRNDLGAEIPASLPNSLAEVCNKKQ 223

  Fly   427 IS---TSSQASNSSKREATPQNSL---GKNRSI-SNSPNVEKPVSGTVSSTASAVDS--TNVSSQ 482
            :|   .|||.....|.||...::|   |:|.|. |:..||...........||..|.  .|:..|
Yeast   224 LSYDLRSSQPPTKRKEEANEVDNLRDNGQNSSSDSSGSNVLSNEDSIKQKYASLTDDQVANMREQ 288

  Fly   483 WT-----KFSE-----SPTTSAVSVQSTT 501
            ..     |.||     |..:..::::|.|
Yeast   289 LEGLLNYKKSEKTQGGSKLSKRINIRSIT 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RepsNP_609487.2 EH 262..345 CDD:197477 14/49 (29%)
END3NP_014315.1 EF-hand_4 1..104 CDD:289529 20/73 (27%)
EH 123..221 CDD:197477 14/98 (14%)
End3 186..345 CDD:432765 27/132 (20%)

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