DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reps and PAN1

DIOPT Version :10

Sequence 1:NP_609487.2 Gene:Reps / 34542 FlyBaseID:FBgn0032341 Length:907 Species:Drosophila melanogaster
Sequence 2:NP_012271.3 Gene:PAN1 / 854822 SGDID:S000001445 Length:1480 Species:Saccharomyces cerevisiae


Alignment Length:1242 Identity:243/1242 - (19%)
Similarity:390/1242 - (31%) Gaps:463/1242 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SELFQCCDVEKTGKVPMLKATELFRSADIANETVIEITGLAGIP-----STALHISRTQFYSCLK 73
            :.::..||..|.|::       ||....:|...:.::.....||     .|...:|  .|...:.
Yeast   309 ARIWTLCDTSKAGEL-------LFPEFALAMHLINDVLQGDTIPYELDSKTKNEVS--SFIDAIN 364

  Fly    74 LIAAHQ------AAMPLRQELILA----------------TFPLPL--------------PHFS- 101
            |..|:|      |......|.|.|                :|.:||              |..: 
Yeast   365 LSIANQDSSANDAPKTPFDEFITAGVQNLQPQPTGYMPQTSFGIPLQSQITGGGVASALNPQSTG 429

  Fly   102 WKEAVTAPVAVENGLTALPPP----PPTDRRNSLRRNSQQEQLQDTSDVPSTDSEVEQNESVDDA 162
            :....|..:::..|...|.|.    .|...:.::..|:.|.  |.|..:|.|...:.|...:...
Yeast   430 FMAPTTFNMSMNTGTPGLNPQITGGAPASMQPNITGNALQP--QTTGMMPQTTGMMPQTTGMMPQ 492

  Fly   163 TGHGRGTDGCGVVSSSSRENVGRRRGGG------TGG-GS-------PEAWSTNS---------- 203
            |..|              .|:|.:..||      ||| ||       |.:....|          
Yeast   493 TSFG--------------VNLGPQLTGGALQSQYTGGYGSVMPQQSGPASMPNLSFNQQGLQSQL 543

  Fly   204 ----DSPT----PTNSVAERP-WAQDTLWQGLLGDEHRQLLGTEEESSDRHSSDDDDNESELVTI 259
                ..||    |:|..|..| .||.|   |...:|............|..|.|           
Yeast   544 TGLQPQPTGFLPPSNFSATMPLTAQKT---GFGNNEIYTKSNFNNNLIDNSSQD----------- 594

  Fly   260 YQITPEQREYYNKQFRTVQRDPHGLLSGQAARNFFEKSRIPVEELRHIWQLCDVTRDGALSLSEF 324
             :|:.|::..:.|.|.|......|||....|...|.||.:...:|..||.|||:...|.|:..||
Yeast   595 -KISTEEKSLFYKIFETFDTQNKGLLDSPTAVEIFRKSGLNRADLEQIWNLCDINNTGQLNKQEF 658

  Fly   325 TAAMHLVVLRRNNIPLPTSLPHCLHPNVLQAAASGSGQGVTSSSSAALPQEPP---EADLLHLND 386
            ...||||..:.|..|:|..||..|.|:..:...:...|..|..::.   :|.|   :.|.|...:
Yeast   659 ALGMHLVYGKLNGKPIPNVLPSSLIPSSTKLLDNLKNQLKTEPTTT---KEKPSFGKIDALSYKN 720

  Fly   387 DDED------------------------------DHTDNTIIAGNLSGSST----TSKPR-PNVP 416
            :|:|                              :|:.:|:...::|...|    |:||: ....
Yeast   721 NDDDVLPNYRNRRKVYSAKNEEQSSFSSPSAKSVNHSSSTLQTDDISVDKTVEKKTAKPKYAGFS 785

  Fly   417 SDKNIMNLSSISTSSQASNSSKREATPQNSLGK----------NRSISNSPNVEKPVSGTVSSTA 471
            .:.|:.|::|:      .|..|..:.|:|....          :..|:..||:...:| |:.:  
Yeast   786 REINLKNIASL------ENEIKNISNPENCYDSSIPSDLTSRFDAIIAKLPNLFNEIS-TIDN-- 841

  Fly   472 SAVDSTNVSSQWTKFSESPTTSAVSVQSTTGAAP-----------------VVAAGAAASGASSP 519
               :.||...|..: .::|:       |..|:.|                 :.|..:|.:|.|:.
Yeast   842 ---EITNAKIQLYR-KKNPS-------SIIGSGPNGEITENDRKKAKSRALLRARMSALTGKSTE 895

  Fly   520 GLKPVLF-------DMKRSAQDVVSNPQILHPVPLRVTPIGTAIASSAESSN--EN--------- 566
            ....:..       ::||..|:...|.:|:..:...::.|..::.|:...||  .|         
Yeast   896 SEDSLSMEDEQQSAEIKRIQQENGKNQEIIKDIRSSISDISASLKSTMTGSNMISNQEFERWEFG 960

  Fly   567 ---ESAVAQREDSPKAISSTTVNNQSSAVVPG---------ISGVAGSSHRDSSDLRAIQRPQAK 619
               |..|.:..|..|:.|:.:| .:||..||.         .|..:.|..:.:.:..|..:.|||
Yeast   961 IGLEDGVREFLDDLKSNSNKSV-TESSPFVPSSTPTPVDDRSSSPSYSQFKTAEERAAYLKEQAK 1024

  Fly   620 K----------------------LPAKNSALPP---------------PPQRE-------PS--I 638
            |                      :.::||...|               |.|.|       |:  :
Yeast  1025 KRMKEKLAKFDKNRRNVTQSSRSISSENSREQPQQIAGSSNLVEPRATPFQEEKYVEVAQPTQPV 1089

  Fly   639 GSTGPSESQEP-QAAYVASSLASKKEPPPLPPPRPHR---HARSSSLD-------------LNKF 686
            .||.|.:..:| |...........:...|:.|.:|.:   :|:..|.|             |.:.
Yeast  1090 QSTQPVQPTQPVQPTQPVQPTQPVQPTQPVQPTQPVQNVYNAKQESDDEDEDDEEKRLQEELKRL 1154

  Fly   687 KI------------------------------------GATGGAQQAEITAQASFDM-------- 707
            |:                                    |.....|.|.:...|:|..        
Yeast  1155 KLKKKADKEKRLAALRKQIEDAQNESDEEETNGKDNFGGHVNVPQAAPVAPSAAFSQNSTNAPRS 1219

  Fly   708 ----------QTSTGFADFT-----HFADEGAA-------------------------------- 725
                      :.|||....|     :|.|..|:                                
Yeast  1220 VHAAVTPAAGKNSTGLPSTTMGHNPYFKDASASSTSTFDARAAEMQRRIQRGLDEDEDDGWSDED 1284

  Fly   726 ---------NVVDEQQL----HSLPP---AAPPPQAAVVPPTRITLQQA---QQRVSAFEVYRKP 771
                     |.|:|.::    |:..|   |||.|....|||. :.:.||   .::.|...:  .|
Yeast  1285 ESNNRVAVDNKVEEAKIGHPDHARAPPVTAAPLPSVTPVPPA-VPVPQANTSNEKSSPIPI--AP 1346

  Fly   772 QTPRGSQSPPQQPPPPAPAV-GLTTQTGQLPSAESFEKRVTAISDSLRHVSFKQG---------- 825
            ..|..:|.||....||.||| |.  |...:|||.:.   .||:..|........|          
Yeast  1347 IPPSVTQEPPVPLAPPLPAVDGF--QEPPIPSAPAI---ATAVQKSGSSTPALAGGVLPPPPPLP 1406

  Fly   826 --QANTTEVLQRLREQNNSLLHLCN-------------DLSDELL----SVQTRKEEMRLKLEGL 871
              ||:|:|.:         :.|:.|             |..|::|    ||.|.:||     ||.
Yeast  1407 TQQASTSEPI---------IAHVDNYNGAEKGTGAYGSDSDDDVLSIPESVGTDEEE-----EGA 1457

  Fly   872 NASDSTG 878
            ....:.|
Yeast  1458 QPVSTAG 1464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RepsNP_609487.2 EH 262..345 CDD:197477 29/82 (35%)
PAN1NP_012271.3 DUF1720 144..243 CDD:369766
EH 265..356 CDD:197477 10/53 (19%)
DUF1720 <391..453 CDD:369766 8/61 (13%)
DUF1720 459..553 CDD:369766 22/109 (20%)
EH 595..688 CDD:197477 33/92 (36%)
MAT1 <833..>934 CDD:461894 18/114 (16%)
PAT1 982..>1127 CDD:401645 27/145 (19%)
Amelogenin <1064..1125 CDD:197891 11/60 (18%)
Blue background indicates that the domain is not in the aligned region.

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