DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reps and AT1G21630

DIOPT Version :9

Sequence 1:NP_609487.2 Gene:Reps / 34542 FlyBaseID:FBgn0032341 Length:907 Species:Drosophila melanogaster
Sequence 2:NP_001185056.1 Gene:AT1G21630 / 838765 AraportID:AT1G21630 Length:1247 Species:Arabidopsis thaliana


Alignment Length:653 Identity:126/653 - (19%)
Similarity:201/653 - (30%) Gaps:240/653 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 YSELFQCCDVEKTGKVPMLKATELFRSADIANETVIEITGLAGIPSTALHISRTQFYSCLKLIAA 77
            :...|:..|::..|.:...:|...|:.:::....:.::...|. ...|.::.|.:||:.|||:..
plant    13 FDTYFRRADLDGDGHISGAEAVAFFQGSNLPKHVLAQVWSYAD-SKKAGYLGRAEFYNALKLVTV 76

  Fly    78 HQAAMPLRQELI------------------LATFPLPLPH----FSWKEAVTAPVAV-------- 112
            .|:...|..|::                  ||..|.|.|.    .:..:.||:..:|        
plant    77 AQSRRELTAEIVKAAIYSPASANIPAPKINLAATPSPQPRGVLPATQAQGVTSMPSVAAGVRGPH 141

  Fly   113 ----------------ENGLTALPP-------------------------PPPTDRRN------S 130
                            :|..|.:||                         |.|:|..:      |
plant   142 MGGTVSTSNQQVVPGQQNQFTGIPPSQTQQNFQSPGMPAGGTNAPRPANQPMPSDWLSGRSVGPS 206

  Fly   131 LRRNSQQEQLQDT--------------------------------------------------SD 145
            ...|||....|.|                                                  |:
plant   207 GNVNSQIPSSQSTYGLTAPNSTANHITKPHITPAVTSSTTTRPQESAPVHNPQESSATFGSRVSN 271

  Fly   146 VPSTDSEVEQNESVDDATGHGRGTDGC--GVVSSSSRENVGRRRGGGTGGGSPEAWSTNSDSPTP 208
            ||| :..|.::.....|:|:|..:|..  .|.|.:|.:......|..:..|.....:.....|..
plant   272 VPS-NQLVPKDPKELAASGNGFTSDSLFGDVFSVTSTQPKQHPTGSASTTGISSVTTGTVAGPEI 335

  Fly   209 TNSVAER---PWAQDTLWQGLLGDEHRQLLGTE-----------------------------EES 241
            |.||..:   | .|.:|.|..:|.: .||.|..                             :..
plant   336 TQSVVRQSSIP-QQGSLSQHAVGVQ-TQLTGNSGQPYTSSGAASGPPGSTVGVGISATSQLAQRP 398

  Fly   242 SDRHSSDDDDNESELVTIY-QITPEQREYYNKQFRTVQRDPHGLLSGQAARNFFEKSRIPVEELR 305
            ...||......:.:....: ::||...:.|.|.|..|..|..|.::|..|||.|...|:|.:.|:
plant   399 PHPHSQPQPRPQGQSQPPWPKMTPADVQKYTKVFVQVDTDRDGKITGNQARNLFLSWRLPRDALK 463

  Fly   306 HIWQLCDVTRDGALSLSEFTAAMHLVVLRRNNIPLPTSLP-HCLHPNVLQAAASGSGQGVTSSSS 369
            .:|.|.|...|..|||.||..|::|:...|...|||...| ..:|.   ::..:..||.|....:
plant   464 QVWDLSDQDNDSMLSLREFCIAVYLMERYREGRPLPPVFPSSIIHS---ESMFTSPGQSVAPHGN 525

  Fly   370 AAL--PQ-----------EPPEADLLHLNDDDEDDHTDNTIIAGNLSGSSTTSKPRPNVPSDKNI 421
            |:.  ||           .||                     ||   ......:|.|..|||..:
plant   526 ASWGHPQGFQQQPHPGGLRPP---------------------AG---PKGKPPRPVPLSPSDGMV 566

  Fly   422 MNLSSISTSSQASNSSKREATPQNSLGKNRSISNSPNVEKPVSGTVSSTASAVDSTNVSSQWTKF 486
                             :...|:..:         |.:|||:...:|....  ||.|     |||
plant   567 -----------------QPTQPKRKM---------PVLEKPLVDQLSKEEQ--DSLN-----TKF 598

  Fly   487 SES 489
            .|:
plant   599 EEA 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RepsNP_609487.2 EH 262..345 CDD:197477 31/82 (38%)
EH 270..336 CDD:238009 25/65 (38%)
AT1G21630NP_001185056.1 EH 13..79 CDD:238009 13/66 (20%)
EF-hand_7 17..71 CDD:290234 10/54 (19%)
TFIIA 95..>263 CDD:281188 21/167 (13%)
EH 416..509 CDD:197477 32/92 (35%)
EH 428..494 CDD:238009 25/65 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 60 1.000 Domainoid score I3847
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2552
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11216
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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