DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reps and AT1G20760

DIOPT Version :10

Sequence 1:NP_609487.2 Gene:Reps / 34542 FlyBaseID:FBgn0032341 Length:907 Species:Drosophila melanogaster
Sequence 2:NP_173499.1 Gene:AT1G20760 / 838666 AraportID:AT1G20760 Length:1019 Species:Arabidopsis thaliana


Alignment Length:619 Identity:135/619 - (21%)
Similarity:208/619 - (33%) Gaps:210/619 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PETRFYSELFQCCDVEKTGKVPMLKATELFRSADIANETVIEITGLAGIPSTALHISRTQFYSCL 72
            |....:...|:..|::..|::...:|...|:.:.::.:.:.:|..|:. .|.:..:.|..||:.|
plant     6 PNMDQFEAYFKRADLDGDGRISGAEAVGFFQGSGLSKQVLAQIWSLSD-RSHSGFLDRQNFYNSL 69

  Fly    73 KLIAAHQAAMPLRQELI------------------LATFPLPLPHFSWKEAVT-----------A 108
            :|:...|:...|..|::                  |:..|.|.|:   ..|.|           |
plant    70 RLVTVAQSKRDLTPEIVNAALNTPAAAKIPPPKINLSAIPAPRPN---PAATTVGPVSGFGGPGA 131

  Fly   109 PVAVEN-------------------GLTAL-PPPPPTDRRNSLRRNSQQEQLQDTSDVPSTDSEV 153
            |.|:.|                   |||:| |...|..|.::|   |.|.|......|......|
plant   132 PNAIVNQNYFPPQQNQQMRPNQGISGLTSLRPAAGPEYRPSAL---SGQFQPVPVGSVTHPPQPV 193

  Fly   154 EQNESVDDATGHGRGT-------DGCGVVSSSSRENVGRRRGGGTGGGS---------------P 196
            ..:.|     |.|..|       .|.|..|..|         .|.||||               |
plant   194 PTSVS-----GPGSSTFNLNSLYAGAGNTSGYS---------SGFGGGSLAAPSPGLKQESHIDP 244

  Fly   197 EAWSTNSD------------SPTPTNSVAE--------------RPWAQDTLWQ--GLL--GDEH 231
            :|...:.:            .||.:||...              :|.|.|:|..  .:|  |::.
plant   245 KALVVSGNGGDMFSSFQQKQEPTLSNSSISSAIVPTSAGIQPPTKPNALDSLQSTFSMLPSGNQL 309

  Fly   232 RQ---------LLGTEEESS---------DRHSSDDDDNESELVTIYQITPEQREYYNKQFRTVQ 278
            :|         .:.::..||         ..||:...:|:....   ::.|...:.|.|.|..|.
plant   310 QQPRPAASSQPAVSSQGPSSGLPPGSAVGSGHSTPAGNNQPPWP---KMKPSDVQKYTKVFMEVD 371

  Fly   279 RDPHGLLSGQAARNFFEKSRIPVEELRHIWQLCDVTRDGALSLSEFTAAMHLVVLRRNNIPLPTS 343
            .|..|.::|:.|||.|...|:|.|.|:|:|:|.|...|..|||.||..:::|:...|...||||:
plant   372 SDKDGKITGEQARNLFLSWRLPREVLKHVWELSDQDNDTMLSLREFCISLYLMERYREGRPLPTA 436

  Fly   344 LPHCL----------------HPNVLQAAASGSGQG-VTSSSSAALPQEPPEADLLHLNDDDEDD 391
            ||..:                :.|    |..||||| |......|.|..|               
plant   437 LPSSIMFDETLLSISGAPSHGYAN----AGWGSGQGFVQQPGMGARPITP--------------- 482

  Fly   392 HTDNTIIAGNLSGSSTTSKPRPNVPSDKNIMNLSSISTSSQASNSSKREATPQNSLGKNRSI-SN 455
                            |:..||.||: ......|.|..:...:.:...:|...|.||...|. ||
plant   483 ----------------TTGMRPPVPA-PGPQPGSGIPPNQPRNQAPVLDAPFANHLGNGYSASSN 530

  Fly   456 SPNVEKPVSGTVSSTASAVDSTNVSSQWTKFSES 489
            .|.             :|.|...|..:...:.:|
plant   531 LPE-------------AAADEEKVDEKQNAYMDS 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RepsNP_609487.2 EH 262..345 CDD:197477 32/82 (39%)
AT1G20760NP_173499.1 EH 11..77 CDD:238009 13/66 (20%)
PHA03247 <75..357 CDD:223021 57/304 (19%)
EH 351..441 CDD:197477 34/92 (37%)
PRK03918 <569..682 CDD:235175
MSCRAMM_ClfA <698..1013 CDD:468110
Blue background indicates that the domain is not in the aligned region.

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