DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reps and SPBC800.10c

DIOPT Version :9

Sequence 1:NP_609487.2 Gene:Reps / 34542 FlyBaseID:FBgn0032341 Length:907 Species:Drosophila melanogaster
Sequence 2:NP_595112.1 Gene:SPBC800.10c / 2540824 PomBaseID:SPBC800.10c Length:1116 Species:Schizosaccharomyces pombe


Alignment Length:1024 Identity:200/1024 - (19%)
Similarity:343/1024 - (33%) Gaps:320/1024 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDVSLTEPETRFYSELFQCCD---------------VEKTGKVPMLKATELFRSADIANETVIEI 50
            |.::|:..|...:.:||:..|               :||:|..|.:.. ::::.||..|...:..
pombe     1 MSLNLSAEEQTAFDQLFKIADKQDIGVITGEEAVPFLEKSGLAPQVLG-QIWQIADAENRGFLTF 64

  Fly    51 TGLAGIPSTALHISRTQFYSCLKLIAAHQAAMPLRQELILATFPLPLPHFSWKEAVTAPVAVENG 115
            :|               |...::|:|..|..:|                |.:|::...|...:..
pombe    65 SG---------------FVIAMRLVALAQEKLP----------------FDYKKSGKIPYFADIH 98

  Fly   116 LTALPPPPPTDRRNSLRRNSQQEQLQDTSDVPSTDSEVEQNESVDDATGHGRGTDGCGVVSSSSR 180
            ::.:.             :|:..||...::|.|                 |.|:||..:...||.
pombe    99 ISGVD-------------SSKFVQLNRPNNVSS-----------------GDGSDGSFLPPISSD 133

  Fly   181 ENVGRRR-------GGGTGGGSPEAWSTNSDSPTPTNSVAERPWAQDTLWQGLLGDEHRQLLGTE 238
            |....::       ..|...|. .|.|....:|..|..:| |.|       .|:....|..|...
pombe   134 EMTRYQQMFTTVCPTDGLMDGD-RASSIFGRAPLSTEILA-RVW-------NLVDTHKRGALDIR 189

  Fly   239 EESSDRHSSD---DDDNESELVTI---------------------------------------YQ 261
            |.::..|..:   :...:|..|:|                                       :.
pombe   190 EFNTGMHIINLLLNGSLKSPPVSISPSFIASAASTSSVSAPSQYPGLSRSPPVQAPNIPVSDPWA 254

  Fly   262 ITPEQREYYNKQFRTVQRDPHGLLSGQAARNFFEKSRIPVEELRHIWQLCDVTRDGALSLSEFTA 326
            |..:....:.:.|..|.:...|.:||..|.:||..|::|.:.|..||.|.|...:|.|::.||..
pombe   255 IPSQDLTSFCQLFSNVDKAHKGYVSGSEAYSFFLASKLPEDVLAQIWDLSDTNSNGKLNIGEFCI 319

  Fly   327 AMHLVVLRRNNIPLPTSLPHCLHPNVLQAAASGSGQGVTSSSSAALPQEPPEADLLHLNDDDEDD 391
            :::|:.|:.:...||..||    .::|.:.|.      ....|.::|...|              
pombe   320 SLYLIKLKLSGKELPKVLP----SSMLSSVAP------LMQKSKSVPTSIP-------------- 360

  Fly   392 HTDNTIIAGNLS--GSSTTSKPRPNVPS-----DKNIMNLS------SISTSSQASNSSKREATP 443
                :::..|:|  ..:.|..|.|..||     .:::::|.      :::....:||::|..|.|
pombe   361 ----SVVPANISSPNPNPTLAPNPTGPSRVTSGTEDLLSLDATPFSPTLAPQHTSSNATKHSAPP 421

  Fly   444 QN-----------SLGKNRSISNSPNVEKPVSGTVSST---ASAVDSTNVSSQWTKFSESPTTSA 494
            ..           .|........|| ..||.|.|  ||   .|:...|...:...|    |:...
pombe   422 VTKSAPFPVVSPLQLNHTPGFPTSP-AAKPNSPT--STFFPQSSFGQTIAKNTMDK----PSAVR 479

  Fly   495 VSVQSTTGAAPVVAAGAAAS---GASSPGLKPVLF-------DMKRSAQDVVSNPQILHPVPLRV 549
            .||.|.. |||:....:|..   .|..|.|:..|.       |:::|::||.:|   |..|..:|
pombe   480 TSVPSQL-AAPIPQVASAEQLKLAAEVPKLESQLSQVKKSNDDLQKSSRDVAAN---LSDVKAKV 540

  Fly   550 TPIGTA----IASSAESSNENESAVAQREDSPKAISSTTVNNQSSAVVPGISGVAGSSHRDSSDL 610
            :.|..|    :|.:.:.|.:.|:..||.|.         ||.:.|.:              .:.|
pombe   541 SEIRKAYDEELAKAKQISLDIETNKAQTEQ---------VNREYSIL--------------EATL 582

  Fly   611 RAIQRPQAKKLPAKNSALPPPPQREPSIGSTGPSESQEPQAAYVASSLASKKEP-PPLPPPRPHR 674
            .|:|:...:|.......:......:..:.|:..|..|      :.|.:|.|::. ..|.......
pombe   583 NALQKQNKQKGEVLEQVVAESEAAKNMVESSNASIQQ------LKSEVADKEQTLAQLHLQLDEM 641

  Fly   675 HARSSSLDLNKFKIGATGGAQQAEITAQASFDMQ-----TSTGFADFTHFADEGAANVVDEQQLH 734
            ..|..|||            ::::..:|...|::     :.|..|..|....|.:..:..|:|..
pombe   642 TQRLVSLD------------EESKAVSQRKLDLEYKINNSKTQLATATEEYHEHSKQLEAEKQEL 694

  Fly   735 SLPPAAPPPQAAVVPPTRITLQQAQQRVSAFEVYRKPQ---TPRGSQSPPQQPPPPAPAVGLTTQ 796
            |                  .|:...:.|:..|...||:   |||.         |...:.|:||.
pombe   695 S------------------KLEDGLKSVNLTEEAPKPEVDSTPRF---------PSFTSNGITTD 732

  Fly   797 TGQLPSAESFEKRVTAISDSLRHVSFKQGQANTTEVLQRLR----EQNNSLLHLCNDLSDELLSV 857
            ...||.        |..|...:|.|| ....||      ||    ..|||..|         .|.
pombe   733 KPTLPD--------TTSSVPTQHNSF-DAMHNT------LRSPSLNSNNSSAH---------AST 773

  Fly   858 QTRKEEMRLKLEGLNASDSTGRTSSSICAPVTANVTGGSSGSAGAAYTN 906
            .:|.....||:.|.::..|....|....|....:::..:|.|...:..|
pombe   774 VSRNPFHNLKISGASSPVSNFWESEFASAVFPRSISKTTSLSVNNSSVN 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RepsNP_609487.2 EH 262..345 CDD:197477 24/82 (29%)
EH 270..336 CDD:238009 21/65 (32%)
SPBC800.10cNP_595112.1 EH 13..79 CDD:238009 14/81 (17%)
EH 138..203 CDD:238009 14/73 (19%)
EH 252..345 CDD:197477 27/96 (28%)
EH 263..329 CDD:238009 21/65 (32%)
KASH_CCD 493..701 CDD:291334 49/269 (18%)
BAR 499..704 CDD:299863 48/266 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11216
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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