DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reps and Reps1

DIOPT Version :10

Sequence 1:NP_609487.2 Gene:Reps / 34542 FlyBaseID:FBgn0032341 Length:907 Species:Drosophila melanogaster
Sequence 2:NP_033074.2 Gene:Reps1 / 19707 MGIID:1196373 Length:795 Species:Mus musculus


Alignment Length:966 Identity:259/966 - (26%)
Similarity:373/966 - (38%) Gaps:282/966 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VSLTEPETRFYSELFQCCDVEKTGKVPML-KATELFRSADIANETVIEITGLAGIPSTAL-HISR 65
            ::|::.|.::||:||..||:|.|.||.:. :..||||:|.:.|:.|::|..|.|  :|.| :..|
Mouse     4 LTLSDAEQKYYSDLFSYCDIESTKKVVVNGRVLELFRAAQLPNDVVLQIMELCG--ATRLGYFGR 66

  Fly    66 TQFYSCLKLIAAHQAAMPLRQELILATFPLPLPHFSWKEAVTAPVAVENGLTA------------ 118
            :|||..|||:|..|:..|||.|.|.....||||.|     |.:....|:.|.|            
Mouse    67 SQFYIALKLVAVAQSGFPLRVESINTVKDLPLPRF-----VASKNEQESRLAASYSSDSENQGSY 126

  Fly   119 ---LPPPPPTDR-------RNSLRRNSQQEQLQDTSDV------PSTDSEVEQNESVDDATGHG- 166
               :||||...:       .::::.....||.:..|.|      |.|.....:..|...:.|:. 
Mouse   127 SGVIPPPPGRGQVKKGPGSHDAVQPRPSAEQQEPVSPVVSPQQSPPTSPHTWRKHSRHPSGGNSE 191

  Fly   167 RGTDGCGVVSSSSRENVGRRRGGGTGGGSPEAWSTNSDSPTPTN--SVAERPWAQDTLWQGLLGD 229
            |...|.|...|.    .|..:.|.:.|.:  .||..|..|...|  |.|:.|.....|.......
Mouse   192 RPLTGPGPFWSP----FGDAQAGSSAGDA--VWSGQSPPPPQDNWVSFADTPPTSALLTMHPASV 250

  Fly   230 EHRQLLGTEEESSD-----RHSSDDDDNESELVTIYQITPEQREYYNKQFRTVQRDPHGLLSGQA 289
            :.:..:.|...::.     |.||..:|.       ::||.|||:||..||:|:|.|.:|.:.|.|
Mouse   251 QDQTTVRTVASAATANEIRRQSSSYEDP-------WKITDEQRQYYVNQFKTIQPDLNGFIPGSA 308

  Fly   290 ARNFFEKSRIPVEELRHIWQLCDVTRDGALSLSEFTAAMHLVVLRRNNIPLPTSLPHCLHPNVLQ 354
            |:.||.||::|:.||.|||:|.|..:||||:|.||.||.||||.|:|...||..||..|.|.::.
Mouse   309 AKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVARKNGYDLPEKLPESLMPKLID 373

  Fly   355 AAASGSGQGVTSSSSAALPQEPPEADLLHLNDDDEDDHTDNTIIAGNLSGSSTTSKPRPNVPSDK 419
            .           ..||.:.::|.|.                     ..|||...:.|        
Mouse   374 L-----------EDSADVGEQPGEV---------------------GYSGSPAEAPP-------- 398

  Fly   420 NIMNLSSISTSSQASNSSKREATPQNSLGKNRSISNSPNVEKPVSGTVSSTASAVDSTNVSSQWT 484
                      |...|..|..:..|:    .|:|                           |.||.
Mouse   399 ----------SKSPSMPSLNQTWPE----LNQS---------------------------SEQWE 422

  Fly   485 KFSESPTTSAVSVQSTTGAAPVVAAGAAASGASSPGLKPVLFDMKRSAQDVVSNPQILHPVPLRV 549
            .|||..::|....|..:..||           :.|                  :..|:||||:|:
Mouse   423 TFSERSSSSQTLTQFDSNIAP-----------ADP------------------DTAIVHPVPIRM 458

  Fly   550 TPIGTAIASSAESSNENESAVAQREDSPKAISSTTVNNQSSAVVPGISGVAGSSHRDSSDLRAIQ 614
            ||                |.:..:|...|..||...|..|..:|         ...|.|:...|.
Mouse   459 TP----------------SKIHMQEMELKRTSSDHTNPTSPLLV---------KPSDLSEENKIN 498

  Fly   615 RPQAKKLPAKNS--------ALPPPPQREPSIGSTGPSESQEPQAAYVASSLASKKEPPPLPPPR 671
              .:.|.|:.|:        :.|..|::   |||     |...|.::..:|..:...|||.|.|:
Mouse   499 --SSVKFPSGNTVDGYSSSDSFPSDPEQ---IGS-----SVTRQRSHSGTSPDNTAPPPPPPRPQ 553

  Fly   672 PHRHARSSSLDLNKFKIGATGGAQQAEITA------------QA------------SFDMQTST- 711
            | .|:||||||:|: ....|.|.|||.:.|            ||            .....||| 
Mouse   554 P-SHSRSSSLDMNR-TFAVTTGQQQAGVVAHPPAVPPRPQPSQAPGPSVHRPVDADGLITHTSTS 616

  Fly   712 --------GFADFTHFADEGAANVVDEQ----QLHSLPPAAPPPQAAVVPPTRITLQQAQQRVSA 764
                    .||||:.|....|:||.:||    :.|   |...|.:.|..|.:.:...||..:...
Mouse   617 PQQIPEQPNFADFSQFEVFAASNVSEEQDSEAEKH---PEVLPAEKASDPSSSLRAAQADSKAEE 678

  Fly   765 FEVYRKPQTPRGSQSPPQQPPPPA-----------PAVGLTTQ-TGQL-------PS-AESFEKR 809
            ......|.......:|...||.|.           |.|...|| ||.|       || ..|..|.
Mouse   679 KTATNVPANVSKGTTPLAPPPKPVRRRLKSEDELRPDVDEHTQKTGVLAAVLTSQPSIPRSVGKD 743

  Fly   810 VTAISDSLRHVSFKQGQANTTEVLQRLREQNNSLLHLCNDLSDELLSVQTRKEEMR 865
            ..||..|:|    :..:.||  ||.||   |:.|.....|:.:|.:|::.:.|::|
Mouse   744 KKAIQASIR----RNKETNT--VLARL---NSELQQQLKDVLEERISLEVQLEQLR 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RepsNP_609487.2 EH 262..345 CDD:197477 45/82 (55%)
Reps1NP_033074.2 EH 6..85 CDD:197477 33/80 (41%)
PRK07764 <99..228 CDD:236090 29/139 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..238 28/131 (21%)
EH 278..369 CDD:197477 48/97 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 380..433 19/122 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 469..720 69/274 (25%)
Interaction with RALBP1 651..795 40/152 (26%)

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