DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reps and reps2

DIOPT Version :10

Sequence 1:NP_609487.2 Gene:Reps / 34542 FlyBaseID:FBgn0032341 Length:907 Species:Drosophila melanogaster
Sequence 2:XP_012812936.1 Gene:reps2 / 100497375 XenbaseID:XB-GENE-985000 Length:693 Species:Xenopus tropicalis


Alignment Length:955 Identity:221/955 - (23%)
Similarity:333/955 - (34%) Gaps:386/955 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDVSLTEPETRFYSELFQCCDVEKTGKVP--MLKATELFRSADIANETVIEITGLAGIPSTALHI 63
            :.:.:::.|.:.|||||..|..|.:.::.  ..|..||||::.:..:|:.:||.|.|    |.|:
 Frog    30 LHLPMSDKEQKCYSELFSMCQAEGSARLAAGSNKVGELFRASKLPADTLHQITELCG----AKHV 90

  Fly    64 ---SRTQFYSCLKLIAAHQAAMPLRQELILATFPLPLPHFSWKEAVT--------APVAVENGLT 117
               ...||:..|||||..|..:|:..|.|.:  .||||||.:.::::        |.|..|    
 Frog    91 GYFGPAQFFVALKLIAVAQTGLPVCLESIKS--ELPLPHFIFMKSLSDSDLKHGAATVTSE---- 149

  Fly   118 ALPPPPPTDRRNSLRRNSQQEQLQDTSDVPSTDSEVEQNESVDDATGHGRGTDGCGVVSSSSREN 182
                   |...||..:        |.|...|:|...:|             :|...:||......
 Frog   150 -------TQGLNSATK--------DKSYFKSSDEGEKQ-------------SDAKTLVSPKKSPP 186

  Fly   183 VGRRRGGGTGGGSPEAW-----STNSDSPTPTNSVAERPWAQDTLWQGLLGDEHRQL-------- 234
            |           ||:.:     .:.||.   .||.|.....|.:|.|   .|.|..|        
 Frog   187 V-----------SPQNYGHSLLQSRSDH---HNSAAAYETRQPSLLQ---QDGHLPLNYGNQPAP 234

  Fly   235 ----LGTEEESSDRHSSDDDDNESELVTIYQITPEQREYYNKQFRTVQRDPHGLLSGQAARNFFE 295
                |.....|.:|.|.||..|.||  ..::||.||||||..||.|:|.|...|:||..|:|||.
 Frog   235 LQLSLSRLSLSVERESLDDPSNYSE--DPWRITEEQREYYTNQFITLQPDLKSLISGSVAKNFFT 297

  Fly   296 KSRIPVEELRHIWQLCDVTRDGALSLSEFTAAMHLVVLRRNNIPLPTSLPHCLHPNVLQAAASGS 360
            ||::|:.||.|||.|.||..||||:|:||:||.||:|.|:|...:|.:||..|...::|      
 Frog   298 KSKLPISELSHIWDLSDVDCDGALTLTEFSAAFHLIVARKNGYEVPDTLPRTLLAEIIQ------ 356

  Fly   361 GQGVTSSSSAALPQEPPEADLLHLNDDDEDDHTDNTIIAGNLSGSSTTSKPRPNVPSDKNIMNLS 425
                                                  .|:|                       
 Frog   357 --------------------------------------TGSL----------------------- 360

  Fly   426 SISTSSQASNSSKREATPQNSLGKNRSISNSPNVEKPVSG----------TVSSTASAVDSTNVS 480
                                               ||:||          ||..:...:::.   
 Frog   361 -----------------------------------KPISGDAYEGCRGTSTVCQSRKELETV--- 387

  Fly   481 SQWTKFSESPTTSAVSVQSTTGAAPVVAAGAAASGASSPGLKPVLFDMKRSAQDVVSNPQILHPV 545
                  .|.|.||          .|:                 :|||.:.||.:           
 Frog   388 ------CEDPATS----------EPL-----------------ILFDEETSATE----------- 408

  Fly   546 PLRVTPIGTAIASSAESSNENESAVAQREDSPKAISSTTVNNQSSAVVPGISGVAGSSHRDSSDL 610
                   .::.|::.:..||.:...|:.:.....:|...|.      |........|.|::|..|
 Frog   409 -------PSSAAAAPQDQNEVKQDSAENDKQGSKLSFPLVE------VKSFKTFKSSVHQESYTL 460

  Fly   611 RAIQRPQAKKLPAKNSALPPPPQREPSIGSTGPSESQEPQAAYVASSLASKKEPPPLPPPRPHR- 674
            :.  ||:::                 |..:|...|:.:            |.|.||.|||||.: 
 Frog   461 KT--RPRSR-----------------SYSNTSIEETMK------------KVEDPPTPPPRPQKT 494

  Fly   675 HARSSSLDLNKFKIGATGGAQQAEITAQASFDMQTSTGFADFTHFADEGAANVVDEQQLHSLPPA 739
            |:|:||||||:.       .||....|:|.:                              :||.
 Frog   495 HSRASSLDLNRI-------IQQNSPAARAGW------------------------------IPPP 522

  Fly   740 APPPQAAV-------------VP---PTRITLQQAQQRVSAFEVYRKPQT----PRGSQSPPQQ- 783
            |.||:..:             :|   |.....:..:||....|:...|||    |:..:|.|.: 
 Frog   523 ALPPRPCISQNPHHSSNTDQKMPIQQPNFADFRSQEQRERVAEIELHPQTNKMLPQTEESSPAKK 587

  Fly   784 -----PPPPAP-------------------AVGLTTQTGQLPSAESFE----KRVTAISDSLRHV 820
                 .||..|                   |..:|:....|.|..|.:    ||..||..::|  
 Frog   588 EILLNQPPMKPLRRKFLTESQVLENHELSSASSVTSSVTSLKSHPSVQKQPSKRKKAIQTAIR-- 650

  Fly   821 SFKQGQANTTEVLQRLREQNNSLLHLCNDLSDELLSVQTRKEEMR 865
              |..:||.  ||.||   |:.|.....::..|.::::|:.|::|
 Frog   651 --KNKEANA--VLARL---NSELQQQLKEVHQERIALETQLEQLR 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RepsNP_609487.2 EH 262..345 CDD:197477 46/82 (56%)
reps2XP_012812936.1 EFh 42..110 CDD:415501 26/71 (37%)
EH 261..353 CDD:197477 49/91 (54%)

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