DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdr59 and Wdr59

DIOPT Version :10

Sequence 1:NP_609485.4 Gene:Wdr59 / 34540 FlyBaseID:FBgn0032339 Length:969 Species:Drosophila melanogaster
Sequence 2:NP_001418974.1 Gene:Wdr59 / 690751 RGDID:1592213 Length:1003 Species:Rattus norvegicus


Alignment Length:1032 Identity:353/1032 - (34%)
Similarity:515/1032 - (49%) Gaps:148/1032 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NKYYEHRDSQATAMSVDYSGQWVLLAGRGHLALQRLGQDDGSLRRHERQSKYEVSVAEFAICPSR 97
            |...|.|||||||||||..||..:|:||..|.:..|.......|:..||||:::...::....|.
  Rat     9 NVVVEFRDSQATAMSVDCVGQHAVLSGRRFLYIVNLDAPFEGHRKISRQSKWDIGAVQWNPHDSF 73

  Fly    98 KEYCAIATSQHIDIVRWGTAEPHYEMSLRGHTRTVTDIDWHGKDPNLLVSCSIDTFSHIWDLREP 162
            ..|.|.:::|.:|:.:|.........:|:||||.::|:||...:|:|||:.|:||:.:|||:::.
  Rat    74 AHYFAASSNQRVDLYKWKDGSGEVGTTLQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDT 138

  Fly   163 RKPALSLNAVCMSGATQVGFNRVSGNLLAAAHDGDLRIWDIRKGSCPTHYITAHLNRVHGINWSH 227
            ||||::|:||  :||:||.:|:.:.|.||.:||||:||||.||.|....|:.|||:::||::|..
  Rat   139 RKPAVALSAV--AGASQVKWNKKNANYLATSHDGDVRIWDKRKPSTAVEYLAAHLSKIHGLDWHP 201

  Fly   228 KRETCLATASQDGTVKYFDVCNPRRAEKIITTMSPVWRARYTPIGNGLVSIVVPHLGRGENSLLL 292
            ..|...||:|||.:||::|...||:...|:....|||:|||||..||||:::||.| |.||||||
  Rat   202 DSEHIFATSSQDNSVKFWDYRQPRKYLNILPCQVPVWKARYTPFSNGLVTVMVPQL-RRENSLLL 265

  Fly   293 WSNSKQTDPICSFVGHTDVILDFAWRPNRESSNEIELVTWSRDRTLRVWKIDDNMLKLCEPSAEE 357
            |:......|:.:||||.||:|:|.||..:|.|.:.:|||||||:|||:|::|..|.:||.....:
  Rat   266 WNVFDLNTPVHTFVGHDDVVLEFQWRRQKEGSKDYQLVTWSRDQTLRMWRVDYQMQRLCANDILD 330

  Fly   358 IESRFEPDLSELRVPTPPEFLHPRSILVAASLPISTGDG-ACNTLPMARSPSFGGGYYRREEPHI 421
            ....|...:|.|  |.|.:.|||:......||.....|| ..:.|.:...|.......||     
  Rat   331 GVDEFIESISLL--PEPEKTLHPQDTDHQPSLSHGEEDGNVTDVLAIKEDPPSSLLEERR----- 388

  Fly   422 ARSLTDQ---PTCSLHHEFSLLNTNMPHVEVDTLDAIKRYACFKICAGGHTVILQVTFTTSYPSP 483
                :||   |. :|..||||:|..:.:|.|: :||..|.....:....|.|.:.|||...||: 
  Rat   389 ----SDQLGLPQ-TLQQEFSLINVQIRNVNVE-MDAADRSCTVSVHCSNHRVKMLVTFPAQYPN- 446

  Fly   484 SAPPDFQLCQGTTLSSEVSGVLLKVLRCNALQRVKKSRTCLEQCLRALVAAMKKKVAAVGGADRS 548
            :|.|.||....||::|.|...|||:|:..:||:||::::|||.|||.||:.::..|.....|..:
  Rat   447 NAAPSFQFINPTTITSAVKAKLLKILKDTSLQKVKRNQSCLEPCLRQLVSCLESFVNQEDSASSN 511

  Fly   549 QLLLQS---------PRLEGALSSTLHDACIPYPRTSGVHFNAIGMLTTFAQPVNNKRLTLRQHT 604
            ...|.:         .|:..|..| ..||.||:|||||..|...|.|..|.:|:...|..  ..|
  Rat   512 PFALPNSVTPPLPTFARVTTAYGS-YQDANIPFPRTSGARFCGAGYLVYFTRPMTMHRAV--SPT 573

  Fly   605 ALTPRTFSSING--SGLLGNVMATAQREAN------------------ASFYLQERMISGKPGKQ 649
            ..|||:.|:::.  :||:..:....:...|                  :|||.:|||......::
  Rat   574 EPTPRSLSALSAYHTGLIAPMKIRTEAPGNLRLYSGSPTRSEKEQVSISSFYYKERMSPRSARRR 638

  Fly   650 RAIRQMNGSP-----------------------VVHVYDTSSLLHISRRMAREFSLDKCNIAETC 691
            .:|:.:|..|                       .|.:.|.|.||.:.:.:...:.|:..:..|||
  Rat   639 WSIQAINDFPKSRRWKSKREGSDSGNRPIKAAGKVIIQDVSCLLPVHKSLGELYILNVNDTQETC 703

  Fly   692 RKNGEICRQHGRLDLVPVWLLAEL-------------IATPQIPHETLNDLLFYKDPFKKSLLES 743
            :||.......||.|||.||.||.:             :.||...|           ||.:.||||
  Rat   704 QKNATSAMLVGRKDLVQVWSLATVATDLCLGPKSDPDLETPWARH-----------PFGRQLLES 757

  Fly   744 LIMHYAISGDIQTAVLLACLFD--KCPTGGGAIMEKTVRLP------PQLNSQISPYHTVLPLDV 800
            |:.||....|:||..:|..:|:  ..|.|          ||      |..:|.....|:..|...
  Rat   758 LLAHYCRLRDVQTLAMLCSVFEAQSRPQG----------LPNPFGPFPNRSSNFVVSHSRYPSFT 812

  Fly   801 KSSSSS-------NT--W-------QQLKQLRSNSWSDSLDLEI----------KQIQSDAYACS 839
            .|.|.|       ||  |       ::.:.: |:.|.:|...|:          ::.:.|.:..:
  Rat   813 SSGSCSSMSDPGFNTGGWSIVSLAGRETEHI-SSPWGESSPEELRFGSLTYSDPRERERDQHDKN 876

  Fly   840 --LIRRTKMPLFDQFKRAYAEILFGWQLLSKRALILKHTQNTPPPVQGVEFVTECRKCAKPKRTP 902
              |:.......||.||:.|.|||:.|.|..|||.:||.....|.|.:|:||...|..|....|..
  Rat   877 KRLLDPANTQQFDDFKKCYGEILYRWGLREKRAEVLKFVSCPPDPHKGIEFGVYCSHCRSEVRGT 941

  Fly   903 KCEPCKRPVLFCVLCRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCAT-CGCKCL 958
            :|..||.....|.:|.:.|:|::|.||.||||||..|||:||....||.| |||.||
  Rat   942 QCAICKGFTFQCAICHVAVRGSSNFCLTCGHGGHTSHMMEWFRTQEVCPTGCGCHCL 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr59NP_609485.4 WD40 <47..345 CDD:441893 131/297 (44%)
WD40 repeat 132..170 CDD:293791 17/37 (46%)
WD40 repeat 178..213 CDD:293791 17/34 (50%)
WD40 repeat 220..259 CDD:293791 15/38 (39%)
WD40 repeat 263..306 CDD:293791 23/42 (55%)
WD40 repeat 312..341 CDD:293791 16/28 (57%)
mRING-H2-C3H3C2_WDR59 912..957 CDD:438353 24/45 (53%)
Wdr59NP_001418974.1 WD40 <46..137 CDD:441893 29/90 (32%)
WD40 repeat 62..103 CDD:293791 7/40 (18%)
WD40 100..>343 CDD:475233 115/242 (48%)
WD40 repeat 109..150 CDD:293791 20/40 (50%)
WD40 repeat 154..188 CDD:293791 17/33 (52%)
WD40 repeat 195..229 CDD:293791 14/33 (42%)
WD40 repeat 237..279 CDD:293791 24/41 (59%)
WD40 repeat 285..316 CDD:293791 17/30 (57%)
RWD 401..501 CDD:214735 38/102 (37%)
mRING-H2-C3H3C2_WDR59 951..997 CDD:438353

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