DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdr59 and SPAC11E3.05

DIOPT Version :9

Sequence 1:NP_609485.4 Gene:Wdr59 / 34540 FlyBaseID:FBgn0032339 Length:969 Species:Drosophila melanogaster
Sequence 2:NP_594930.1 Gene:SPAC11E3.05 / 2541877 PomBaseID:SPAC11E3.05 Length:1323 Species:Schizosaccharomyces pombe


Alignment Length:1111 Identity:283/1111 - (25%)
Similarity:446/1111 - (40%) Gaps:232/1111 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 AMSVDYSGQWVLLAGRGHLALQRLGQDDGSLRRHERQSKYEVSVAEFAICPSRKEYCAIATSQHI 109
            |||:...|:.:.||.|..|.:..|.......|.....:.:||:..::.:..:|.:: .::||...
pombe   237 AMSLSPCGRDIALASRYGLLVLDLDNPYNPPRMLRHSTPWEVADTQWNVHAARDQW-VVSTSSQK 300

  Fly   110 DIVRWGTAEPH---YEMSLRGHTRTVTDIDWHGKDPNLLVSCSIDTFSHIWDLREPRKPALSLNA 171
            .|| |..|.|:   .|..|.||||.|||::||.::|::|.:||||:..|.||||.||.|..|...
pombe   301 TIV-WNLALPNDRAIEFMLHGHTRAVTDMNWHRQNPDVLATCSIDSSVHCWDLRSPRFPVNSFYD 364

  Fly   172 VCMSGATQVGFNRVSGNLLAAAHDGDLRIWDIRKGSCPTHYI--TAHLNRVHGINWSHKRETCLA 234
             ..:|||||.:|..:.::||::|...:||||.|.||.|.|.|  :.::.:::|:.::...||.|.
pombe   365 -WHNGATQVKWNYKNPHILASSHGRLVRIWDDRYGSAPLHTIKTSENITKINGLEFNRACETRLL 428

  Fly   235 TASQDGTVKYFDV-CNPRRAEKIITTMSPVWRARYTPIGNGLVSIVVPHLGRGENSLLLWS--NS 296
            |.:.|.|||:::. .:....|.:|||.||||:||:||.|:|:  |::|.  ||:||:.::.  |.
pombe   429 TCAMDRTVKFWNYEKSTEEPEHLITTDSPVWKARFTPFGDGV--ILMPQ--RGDNSVHMYDCRNL 489

  Fly   297 KQTDP--ICSFVGHTDVILDFAWRPNRE-----SSNEIELVTWSRDRTLRVWKIDDNML------ 348
            .:..|  :..|.||||.:.:|.||...|     ...:.:|:|||:|..:|:|.|.:::|      
pombe   490 DKEGPRAVHRFAGHTDQVKEFLWRCRGEDVFDRDLRDFQLITWSKDHHVRLWPIGNDILNSMGHD 554

  Fly   349 -------KLC-----------EP-----------SAEEIESRFEPDLSELRVPTPPEFLHPRSIL 384
                   ||.           ||           |::.:.| |:.:....|..|..   ..|..:
pombe   555 RTKPVPFKLTRLGAKYRTYSREPLKQSLINTECDSSDAMNS-FDSNFGAERANTSD---LSRGFV 615

  Fly   385 VAA-------SLPISTG---DGACNTLPMA-----RSPSFGG-GYYRREEPHIARSLTDQPTCSL 433
            ..|       :||.|:|   ....:|.||.     |..|.|. |....|.|.           :|
pombe   616 AFANRKKSKYNLPGSSGFMTRSTKSTNPMTPLNWLRGISMGRLGNADWEVPQ-----------NL 669

  Fly   434 HHEFSLLNTNMPHVEVDTLDAIKRYACFKICA-----GGHTVI-LQVTFTTSYPSPSAPPDFQLC 492
            ..|.|.:.....:|..:.:|..:|.....:.|     .|:..| |.|.|..:||. ||.|.|||.
pombe   670 GEELSWIGQKYSNVSFEKIDVAERTCTISLNAPILPDDGYAYIRLHVYFPNNYPI-SATPVFQLE 733

  Fly   493 QGTTLSSEVSGVLLKVLRCNALQRVKKSRTCLEQCLRALVAAM-------------KKKVAAVGG 544
            :.:..:.|....:...|...:.|.:...:.|::.||..|...:             ....::...
pombe   734 RSSAFNDEQFNYVFNTLTSISDQCISSHKYCMDACLSYLSGNLSVDEIWKLGFQKDNSDSSSESS 798

  Fly   545 ADRSQLLLQS-PRLEGALSSTLH-DACIPYPRTSGVHFNAIGMLTTF---------AQPVNNKRL 598
            ||..|.:..| |...|......| ...||.|:|....|.....|..|         ||...|:..
pombe   799 ADIFQDVFPSMPDFRGGDRGLSHKHQNIPLPKTCAAIFCGNDELVCFFTIKADESAAQATANRET 863

  Fly   599 TLRQH--------------------------------------------------TALTPRTFSS 613
            ..||.                                                  :.:.|::.:|
pombe   864 HGRQKLFESFGVLDSSNSVADSDSTNYDDENSLNRGGTSESDSEFIWDVDESNSGSIVFPKSKTS 928

  Fly   614 INGSGLLGNVMATAQREANASFYLQERMISGKPGKQRAIRQ--MNGSP-----VVHVYDTSSLLH 671
            ||    |.|:.:.:.....:.|...:..:|.:|..:.:.|.  :...|     ||.:...|..|.
pombe   929 IN----LNNINSASASIMGSRFGAADIFMSKRPSTKGSNRPSILLSKPSHDFHVVRIISMSKYLP 989

  Fly   672 ISRRMAREFSLDKCNIAETCRKNGEICRQHGRLDLVPVW-----LLAELIATPQIPHETLND--- 728
            :.|.:|.|:.:|..:....|.||.|:..:|....|..||     ||..|..|....|  :||   
pombe   990 VKRALAAEYVVDTGDKVTVCNKNAEVSAKHNYYRLAKVWLMLGRLLGHLSRTENKDH--INDEEA 1052

  Fly   729 LLFYKDPFKKSLLESLIMHYAISGDIQTAVLLACLFD----KCPTGGGAIMEKTVRLPPQLNSQI 789
            ..:.|.|..|.::.||:.:||...:.|...:|||:.|    |..:|..:..:.....|.|:..::
pombe  1053 FPWLKSPLAKWVVNSLLDYYASQCNTQMLAMLACVLDIPNPKKQSGNTSADQVLFNQPKQVTEKL 1117

  Fly   790 SPYHTVLPLDVKSSSSSNTWQQLKQLRSNSWSDS--------------------LDLEIKQIQSD 834
            .....:....:....||::..|:..||.....|:                    :|.: || .:|
pombe  1118 GVQLNLPKTKILEKVSSHSLAQITALREKEPKDADSTYSKEKIFSATSTVHLQLMDYD-KQ-NND 1180

  Fly   835 AYACSLIRRTKM--PLFDQFKRAYAEILFGWQLLSKRALILK---HTQNTPPPVQGVEFVTECRK 894
            ......|..||:  ..|.|::..|||.|..|.....:..:||   |..::|   .....|..|..
pombe  1181 FVDAQEIAYTKLLQQKFIQWRATYAEQLDLWGFFIPKLEMLKFNAHEFSSP---SEKTLVNHCNS 1242

  Fly   895 C-AKPKRTPKCEPCKR--PVLFCVLCRLPVKGAANACLACGHGGHIDHMMQWFEK----HNVCAT 952
            | :....|..||.|..  |.:.|..|.|.:.|....|..|.|..|.|...:||..    ...|::
pombe  1243 CNSTTSNTRICEKCYSLVPRMSCTFCCLSIHGLCIVCGLCLHVMHEDCYKEWFSNGDSISQSCSS 1307

  Fly   953 -CGCKC 957
             |||||
pombe  1308 GCGCKC 1313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr59NP_609485.4 WD40 <92..343 CDD:225201 100/265 (38%)
WD40 repeat 132..170 CDD:293791 20/37 (54%)
WD40 repeat 178..213 CDD:293791 16/34 (47%)
WD40 repeat 220..259 CDD:293791 11/39 (28%)
WD40 repeat 263..306 CDD:293791 16/46 (35%)
WD40 repeat 312..341 CDD:293791 10/33 (30%)
mRING-H2-C3H3C2_WDR59 912..957 CDD:319606 15/49 (31%)
modified RING-H2 finger (C3H3C2-type) 914..953 CDD:319606 12/43 (28%)
SPAC11E3.05NP_594930.1 WD40 105..>488 CDD:225201 94/257 (37%)
WD40 repeat 278..319 CDD:293791 10/42 (24%)
WD40 <288..541 CDD:295369 99/259 (38%)
WD40 repeat 326..362 CDD:293791 18/35 (51%)
WD40 repeat 369..406 CDD:293791 17/36 (47%)
WD40 repeat 414..455 CDD:293791 12/40 (30%)
WD40 repeat 458..501 CDD:293791 16/46 (35%)
RWD 672..777 CDD:214735 26/105 (25%)
Zn_ribbon_17 1259..1318 CDD:293725 18/55 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 167 1.000 Domainoid score I925
eggNOG 1 0.900 - - E2759_KOG0309
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38685
Inparanoid 1 1.050 302 1.000 Inparanoid score I600
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005787
OrthoInspector 1 1.000 - - oto101511
orthoMCL 1 0.900 - - OOG6_104242
Panther 1 1.100 - - LDO PTHR46170
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1668
SonicParanoid 1 1.000 - - X4177
TreeFam 1 0.960 - -
1312.850

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