DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdr59 and wdr59

DIOPT Version :10

Sequence 1:NP_609485.4 Gene:Wdr59 / 34540 FlyBaseID:FBgn0032339 Length:969 Species:Drosophila melanogaster
Sequence 2:XP_009291658.1 Gene:wdr59 / 103909113 ZFINID:ZDB-GENE-120215-187 Length:982 Species:Danio rerio


Alignment Length:1028 Identity:341/1028 - (33%)
Similarity:511/1028 - (49%) Gaps:153/1028 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NKYYEHRDSQATAMSVDYSGQWVLLAGRGHLALQRLGQDDGSLRRHERQSKYEVSVAEFAICPSR 97
            |...|.||:||.|||||..||..:|:||..|.:..|.....:.|:..||||::|...::....|.
Zfish     9 NVVVEFRDAQANAMSVDCLGQHAVLSGRRFLYVVNLETPSEAPRKISRQSKWDVGTVQWNPHKSD 73

  Fly    98 KEYCAIATSQHIDIVRW--GTAEPHYEMSLRGHTRTVTDIDWHGKDPNLLVSCSIDTFSHIWDLR 160
            ....|.:::|.:|:..|  |:.:.|  .||:||||.::|:||...:|..||:.|:||:.:|||..
Zfish    74 AHIFAASSNQRVDLYTWRDGSGKSH--TSLQGHTRVISDLDWSWFEPEFLVTSSVDTYIYIWDTS 136

  Fly   161 EPRKPALSLNAVCMSGATQVGFNRVSGNLLAAAHDGDLRIWDIRKGSCPTHYITAHLNRVHGINW 225
            :.|:|.::|:||  :||:||.:||.:...||::||||:||||.||.:....|:.|||::::|::|
Zfish   137 DTRRPTVTLSAV--AGASQVKWNRRNHYCLASSHDGDVRIWDKRKSNTAVEYVAAHLSKINGLDW 199

  Fly   226 SHKRETCLATASQDGTVKYFDVCNPRRAEKIITTMSPVWRARYTPIGNGLVSIVVPHLGRGENSL 290
            ....|..|||:|||.:|:::|...||:...|::...|||:|||||..||||:::||.| |.||||
Zfish   200 HPDNEYILATSSQDNSVRFWDYRQPRKYLDILSCQVPVWKARYTPFSNGLVTVMVPQL-RRENSL 263

  Fly   291 LLWSNSKQTDPICSFVGHTDVILDFAWRPNRESSNEIELVTWSRDRTLRVWKIDDNMLKLCEPSA 355
            ||||..:...|:.:||||.||:.:|.|||.:|.|.:.:|||.|||:|||:|::|..:.|||  .|
Zfish   264 LLWSTLELNSPVHAFVGHDDVVYEFQWRPQKEGSKDCQLVTLSRDQTLRIWRVDPQLQKLC--CA 326

  Fly   356 EEIESRFEPDLSELRVPTPPEFLHPRSILVAASLPISTGDGACNTLPMARSPSFGGGYYRREEPH 420
            .||       :.||...|........|     ..|:|.|..|.|:|.....|..|          
Zfish   327 NEI-------VDELTTETEKTLRSQDS-----EPPLSPGFTADNSLDQFDGPQSG---------- 369

  Fly   421 IARSLTDQPTCSLHHEFSLLNTNMPHVEVDTLDAIKRYACF-KICAGGHTVILQVTFTTSYPSPS 484
            ::.|..:....:|..||||:|..:.:|.|: :||:.| :|| ....|.:.|.|.|.|...||: :
Zfish   370 LSSSAKNDIPQTLQQEFSLVNLQIRNVNVE-MDAVNR-SCFVSADCGANRVRLVVKFPAQYPN-N 431

  Fly   485 APPDFQLCQGTTLSSEVSGVLLKVLRCNALQRVKKSRTCLEQCLRALVAAMKKKVAAVGGADRSQ 549
            |.|.||....|.:||.:...:.|:|...:||:||:::.|||.|:|.||:.::.......|::...
Zfish   432 AAPSFQFVPPTNISSSMKIKIQKILTDTSLQKVKRNQNCLEPCVRQLVSCLESDGVMEDGSNPYV 496

  Fly   550 L-------LLQSPRLEGALSSTLHDACIPYPRTSGVHFNAIGMLTTFAQPVNNKRLTLRQHTALT 607
            |       |...||:.....| ..||.||:|||||..|...|.|..|.:|:...|.|  ..|..|
Zfish   497 LTNPVTPALPAFPRVTNTYGS-YQDANIPFPRTSGARFCGTGSLVYFTRPMTMHRAT--PPTEPT 558

  Fly   608 PRTFSSING--SGLL-----------------GNVMATAQREAN-ASFYLQERMISGKP------ 646
            ||:.|:::.  ||::                 |:...|.:.:.: :|||.:||    ||      
Zfish   559 PRSLSALSAYHSGVMTPMKMRTESQTTLRLYSGSPTRTDKDQVSISSFYYKER----KPLSAARR 619

  Fly   647 ----------------GKQRAIRQMNGSPV-----VHVYDTSSLLHISRRMAREFSLDKCNIAET 690
                            ||:.. ...:..|:     |.:.:.|.||.:.:.:...:.|:..:|.:|
Zfish   620 WSVQTIHECPKSRRWKGKREG-GDYSNRPIKLAGKVIIQEISCLLSVHKALGETYVLNVNDIQDT 683

  Fly   691 CRKNGEICRQHGRLDLVPVWLLAEL-------------IATPQIPHETLNDLLFYKDPFKKSLLE 742
            |:|||.......|.||..||.||..             ..||...|           ||.:.|||
Zfish   684 CQKNGAAALAVARRDLAKVWALASASTNLNLSPDPDPDAGTPWAKH-----------PFGRHLLE 737

  Fly   743 SLIMHYAISGDIQTAVLLACLFDKCPTGGGAIMEKTVRLPPQ--LNSQISPYHTVLPLDVKS--- 802
            :|:.||:...|:|:..:|..:|    .|.|:..|.......|  ..:..:|:|:..|....|   
Zfish   738 TLLEHYSQLSDVQSLAMLCSVF----RGHGSPQEYFTLYGHQQPRPAVFTPHHSRYPSFTSSSVT 798

  Fly   803 -------SSSSNT-WQQ--LKQLRSNSWSDS------------LDLEIKQIQSDAYACSLIRRTK 845
                   |.|:|| |..  .:.....||.:|            .|...::.:.......|:..:.
Zfish   799 SGSCSSTSDSANTPWNTGGRESEHPPSWGESTPDDYRYANQTYTDPREREKEQHDMNKRLLDPSN 863

  Fly   846 MPLFDQFKRAYAEILFGWQLLSKRALILKHTQNTPPPVQGVEFVTECRKCAKPKRTPKCEPCKRP 910
            ...||.||:.|.|||..|.:..|||.:||.....|.|.:|:||...|..|....|..:|..|||.
Zfish   864 SWQFDDFKKCYGEILHRWGMKDKRAEVLKFVSCPPEPHKGIEFGVYCCHCRSQARGTQCAVCKRF 928

  Fly   911 VLFCVLCRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCAT-CGCKCLERTS 962
            ...|.:|.:.|:|::|.||:||||||..|||.||...:||.| |||.||::::
Zfish   929 TFQCSICHVAVRGSSNFCLSCGHGGHTSHMMDWFRSQDVCPTGCGCHCLQQST 981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr59NP_609485.4 WD40 <47..345 CDD:441893 129/299 (43%)
WD40 repeat 132..170 CDD:293791 14/37 (38%)
WD40 repeat 178..213 CDD:293791 16/34 (47%)
WD40 repeat 220..259 CDD:293791 14/38 (37%)
WD40 repeat 263..306 CDD:293791 24/42 (57%)
WD40 repeat 312..341 CDD:293791 15/28 (54%)
mRING-H2-C3H3C2_WDR59 912..957 CDD:438353 24/45 (53%)
wdr59XP_009291658.1 WD40 <31..317 CDD:441893 124/290 (43%)
WD40 repeat 62..103 CDD:293791 10/42 (24%)
WD40 repeat 109..150 CDD:293791 17/42 (40%)
WD40 repeat 154..187 CDD:293791 15/32 (47%)
WD40 repeat 195..229 CDD:293791 13/33 (39%)
WD40 repeat 237..279 CDD:293791 24/42 (57%)
RWD <418..484 CDD:413438 26/66 (39%)
mRING-H2-C3H3C2_WDR59 930..976 CDD:438353 24/45 (53%)

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