DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16854 and CG9988

DIOPT Version :9

Sequence 1:NP_001245974.1 Gene:CG16854 / 34539 FlyBaseID:FBgn0032338 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_651625.1 Gene:CG9988 / 43388 FlyBaseID:FBgn0039591 Length:668 Species:Drosophila melanogaster


Alignment Length:656 Identity:200/656 - (30%)
Similarity:307/656 - (46%) Gaps:105/656 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 VTTAYFVDTTGCRMPHFE--VSDDTIAQFIFKPRPY-SCNR--ALIRTSDTIPGQLHLNLEASEL 156
            |..||||::..|::|:.:  .||   |..||.|..: :|:.  ||:.....|..|.::......|
  Fly    62 VRPAYFVESAKCKIPYVDPFASD---AMAIFHPEHFETCSNETALVTPIYDISRQRYVLFINESL 123

  Fly   157 LAYYNISDLSSVNCNYTEV--KRKTDSSNTHSPAVSFKLDKV-----MKLPLSSEFICMWCY--- 211
            .:....|:....||.|.|:  .||.||.:        |:::.     .::||..|.:.:.|:   
  Fly   124 ASIILNSNGGEYNCYYQEITRDRKHDSYD--------KMERKYFSQNYEVPLHVEGLILTCHRLG 180

  Fly   212 ---DSLDKLFYKDCHFFAVDKPRIRPPLKTGTDRVSFNKSKEEQERLSVMILGMDSLSHLNFLRQ 273
               |.|....|....:        |||.|    .:|...||.:.   ||::.|:||||.:|    
  Fly   181 NESDILQSDAYNLIQY--------RPPPK----GLSLKPSKRKP---SVLMFGIDSLSRIN---- 226

  Fly   274 MRRTANYVRKHLSHVEFW----GYNKVGDNTFPNLVPLLSGLD-DQELNLACTPKTLRSYDRCSF 333
            :|||...|.|.|:. :.|    ||||:||||||||:.:|:|.: :..:...|........||..|
  Fly   227 LRRTMPKVYKFLTR-DGWFEQQGYNKIGDNTFPNLLAILTGYNPESAIKKVCNWHEDGCLDRTPF 290

  Fly   334 IWKRYQQLGYRSIFAEDVAMLSAFNYNQNGFRKQPTDYYLRPMIMEMEKTVAFKK--DLNMHLCM 396
            ||..::...|.:.:|||.|.::.|||.:.||.:||||:||||:...:|..:...|  |.:|..|:
  Fly   291 IWHYFRNASYLTAYAEDEAGINTFNYWKPGFLEQPTDFYLRPLQKAIESGLNTWKCSDCSMKYCI 355

  Fly   397 GSRRTADVLLEYMKKLVPRM--SRDLYFSFFWTVALTHDYFNFPSLLDEAMLQQLMQLQDSGLLN 459
            |.|.|:....:..:....|.  .|.:: ..||:.:.:||.|..||.:::.:||.|:..:..|:.:
  Fly   356 GRRITSSYAYDMARNFANRFVDERPIW-GLFWSNSFSHDSFQMPSKMEDYVLQYLLDFEADGVFD 419

  Fly   460 RTVVMLLSDHGLRWGSFRRTYQGMMEERQPLMMLLYPPWMTERYPEAIANLRLNARRLTTPFDVH 524
            :::::.|||||.|:|.......|.:|||.|.|.:..|||...:|||....|.||..|||:.:|:|
  Fly   420 QSIMVFLSDHGSRYGRLMSLPSGFLEERLPSMFIYLPPWFRAQYPEYARALELNRNRLTSNYDLH 484

  Fly   525 ATMLQLLNLHNLEADQLQRRSTEMDEPD-STLPRGI------SLFLPIPAARTCEQAGIAAHWCT 582
            .|:..::.|..              .|| .|||:..      |||.|:...|:||.|||..|:||
  Fly   485 NTLKHIIELGG--------------TPDGQTLPKAADCPKCQSLFYPVDETRSCEDAGIPEHFCT 535

  Fly   583 CHQRQELQTNDPRVQRAARYLVRLINNRLKD---SSQCRTLYLNSILQALIAAPHSKIVK-NIST 643
            |...:.|.|.  ..:..|..::..||..|..   |..|..|.|:.|        |...:| .:..
  Fly   536 CVPYKRLDTQ--WAKSIAPKVIGRINEYLAGRNLSKICSELTLSYI--------HLTEMKVELDQ 590

  Fly   644 DYAVDI------TLR--LQTKPGLGVFESTV---RMTGYTTVLTGTISRLNLYGSQSYCLNDPAL 697
            ::..|:      |.|  .:.|.....|.:||   .:|....|...|||||:.|.:.|.|:.|...
  Fly   591 NFHDDVPRAELGTYRTMFKVKQNSADFRATVIFNNVTDSVEVEVPTISRLDSYENVSTCVKDKTD 655

  Fly   698 KMFCYC 703
            ||:|.|
  Fly   656 KMYCIC 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16854NP_001245974.1 DUF229 126..626 CDD:281053 163/534 (31%)
ALP_like 255..533 CDD:293745 102/286 (36%)
CG9988NP_651625.1 DUF229 90..580 CDD:281053 164/542 (30%)
ALP_like 212..493 CDD:293745 102/289 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466459
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JJT
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D31599at6960
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10974
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.