DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16854 and CG6236

DIOPT Version :9

Sequence 1:NP_001245974.1 Gene:CG16854 / 34539 FlyBaseID:FBgn0032338 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_650446.2 Gene:CG6236 / 41857 FlyBaseID:FBgn0038318 Length:680 Species:Drosophila melanogaster


Alignment Length:709 Identity:211/709 - (29%)
Similarity:332/709 - (46%) Gaps:88/709 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 RGQFKKVVIVIFALCVFSYLCVDYNLRTKLLRFRDGFDFMARIEDHYGGNVTTAYFVDTTGCRMP 111
            ||...|:..   ..||...|...|.|..:    || .|...:|| ....::.:|  |:...||.|
  Fly     6 RGTVPKIAA---CCCVVVLLVTWYVLNVE----RD-LDKSLKIE-IIERSIRSA--VNRGECRHP 59

  Fly   112 HFEVSDDTIAQFIFKP-RPYSCNRALIRTSDTIPGQLHLNLEASELLAYYNISDLSSVNCNYTEV 175
            |..:.:..|.:| :|| ...:|...:    |.:..:..:.....|:     .|....|.|:||::
  Fly    60 HLPLDNPDIMKF-YKPVERINCGEGM----DWVMCEKSICFVRPEI-----ASSHEDVICSYTDI 114

  Fly   176 KRKTDSSNTHSPAVSFKLDKVMKLPLSSEFICMWCYDSLDKLFYKDCHFFAVDKPRIRPPLKTGT 240
            .||:|.......::..|...|::   :|:|:.:.|..|..:.::...|......|  |||....:
  Fly   115 IRKSDYKVRFGQSLRMKEPYVLQ---ASDFVKVVCRSSSGESWFGMAHGIRDTVP--RPPASNFS 174

  Fly   241 DRVSF---NKSKEEQERL---------SVMILGMDSLSHLNFLRQMRRTANYVRKHLSHVEFWGY 293
            ..::.   ....:.|:::         :|::.|.||||...|:|::.||..|:.:.|......||
  Fly   175 PNLAVLPPEAVAQAQQQMQDGATAPIYNVLMFGFDSLSRNAFIRKLPRTYEYLTQQLGATVLKGY 239

  Fly   294 NKVGDNTFPNLVPLLSGLDDQELNLACTPKTLR------SYDRCSFIWKRYQQLGYRSIFAEDVA 352
            |.|||.|...|||||:|..:.||     |:|.:      |.|....|||.:.:|||.:.|.||:.
  Fly   240 NIVGDGTPQALVPLLTGFTELEL-----PETRKRLSGAGSVDSYPMIWKDFARLGYMTSFNEDLP 299

  Fly   353 MLSAFNYNQNGFRKQPTDYYLRPMIMEMEKTVAFKKDLNMHLCMGSRRTADVLLEYMKKLVPRMS 417
            .:..|.|...||..||.|:|||...::.|...|..|.    .|:|.:.....:|||.|..:.:..
  Fly   300 NVGTFTYRMTGFEAQPVDHYLRTYYVQAEHMAAESKP----NCIGHQPDHITMLEYTKNFMLKYR 360

  Fly   418 RDLYFSFFWTVALTHDYFNFPSLLDEAMLQQLMQLQDSGLLNRTVVMLLSDHGLRWGSFRRTYQG 482
            ....|:|.:...|:||..|.....|:.:...|:.|::..||:.|::::::|||.|:...|.|.||
  Fly   361 DAPRFAFSFHGGLSHDSINLVGAADDDVHDWLVALKERSLLDDTILIMMADHGNRFAEVRATLQG 425

  Fly   483 MMEERQPLMMLLYPPWMTERYPEAIANLRLNARRLTTPFDVHATMLQLLNLHNL--EADQLQRRS 545
            ..|||.|....::|....:|:|:...|...|...||||||:|||:..::.|...  :..::....
  Fly   426 KQEERLPFFSFVFPESFKKRFPQEYKNFLANEHHLTTPFDIHATLKHVIQLQTAVDQFGEINDPK 490

  Fly   546 TEMDEPD---STLPRG--ISLFLPIPAARTCEQAGIAAHWCTCHQRQELQTNDPR----VQRAAR 601
            ||...|.   |.|.||  :||..|||:.|:|..|.|..|||.|.....||.||.|    :.:||:
  Fly   491 TETSPPGIRISELARGRAMSLLDPIPSNRSCADAYIEPHWCACLNWLPLQLNDSRYTGIILKAAQ 555

  Fly   602 YLVRLINNRLKDSSQ-CRTLYLNSILQALIAAPHSKIVK---NISTD-YAVDIT----------- 650
            .:|..||....:..| |..|.::.:..||...||.::::   |...| :..|:|           
  Fly   556 SIVNAINLATVEQRQYCAPLEIHRVNWALRLQPHKELLQFRTNSDRDGFLADMTGQTLVRDEMYQ 620

  Fly   651 LRLQTKPGLGVFESTVRMT----GYTTVLTGTISRLNLYGSQSYCL--NDPALKMFCYC 703
            |::.|.||.|:||::|..:    ..||.|| .|||:|.||:|:.|:  .||.|:.:|||
  Fly   621 LQVVTMPGEGLFEASVAYSLHTFSATTKLT-DISRVNKYGNQARCIYDRDPELRKYCYC 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16854NP_001245974.1 DUF229 126..626 CDD:281053 156/530 (29%)
ALP_like 255..533 CDD:293745 97/292 (33%)
CG6236NP_650446.2 DUF229 73..581 CDD:281053 156/530 (29%)
ALP_like 201..477 CDD:293745 97/284 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JJT
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10974
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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