DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16854 and CG1428

DIOPT Version :9

Sequence 1:NP_001245974.1 Gene:CG16854 / 34539 FlyBaseID:FBgn0032338 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_610127.1 Gene:CG1428 / 35433 FlyBaseID:FBgn0032967 Length:617 Species:Drosophila melanogaster


Alignment Length:635 Identity:206/635 - (32%)
Similarity:319/635 - (50%) Gaps:97/635 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 FVDTTGCRMPHFEVSDDTIAQFIFKPRPY----------SCNRALIRTSDTIPGQLHLNLEASEL 156
            ||:|:.|     .||..      :||..:          .|....:.|:.|..|        |..
  Fly    46 FVNTSVC-----HVSGQ------WKPTAFYSAIEPVNKLRCRMTQLLTAITQDG--------SNF 91

  Fly   157 LAYYNISDLSSVNCNYTEVKRKTDSSNTHSPAVS-FKL----DKVMKLPLSSEFICMWCYDSLDK 216
            |....||:  .::|.|......|.:.:.|..|.. |.|    .:.:|:....:.:.:.|.|....
  Fly    92 LEAKRISE--DLSCRYWLKSGHTRNHSGHYTAYGHFDLKRGATRKIKIGTGEQIVRIRCSDKFKA 154

  Fly   217 LFYKD-CHFFAVDKPRIRPPLKTGTDRVSFNKSKEEQERLSVMILGMDSLSHLNFLRQMRRTANY 280
            ..|.| .:|.:...|::              .|.|..|:||||:||:||:||::|:|.......:
  Fly   155 SKYHDVLYFLSPPDPKL--------------MSTESSEKLSVMVLGIDSVSHMHFVRYFPLVMAF 205

  Fly   281 VRKHLSHVEFWGYNKVGDNTFPNLVPLLSGLDDQELNLACTPKTLRS------YDRCSFIWKRYQ 339
            :..| .|.:|:||::||.:...||||.|.|            |:.|:      .|..:::|..::
  Fly   206 LENH-PHTKFFGYSRVGLDANANLVPFLGG------------KSSRAAGSDILSDEKAWLWDSFK 257

  Fly   340 QLGYRSIFAEDVA--MLSAFNYNQNGFR---KQPTDYYLRPMIMEMEKTVAFKKDL-NMHLCMGS 398
            ..||.:.:.||.|  :||    |:||.:   |.|.|:.|.|:|:||.....:..|| .|..|...
  Fly   258 MEGYSTAYGEDNAKGILS----NRNGDKELPKSPVDFDLTPVIVEMNNHTRYSIDLKEMIHCTAG 318

  Fly   399 RRTADVLLEYMKKLVPRMSRDLYFSFFWTVALTHDYFNFPSLLDEAMLQQLMQLQDSGLLNRTVV 463
            |:..|||.:::.:|||.|....:|||||......:|:.:...||.:.:..|.:|.|:.:||.|::
  Fly   319 RKFQDVLRDFVLQLVPYMQGMPFFSFFWQSQGVQEYYEYAWHLDLSYMMLLKKLLDADILNNTLL 383

  Fly   464 MLLSDHGLRWGSFRRTYQGMMEERQPLMMLLYPPWMTERYPEAIANLRLNARRLTTPFDVHATML 528
            .|:||||||.|.:|.:.|||.||.||||:.:||.|:..:||.|:.||..||..|.||:|:..|:.
  Fly   384 FLMSDHGLRAGEYRMSLQGMKEESQPLMVAIYPEWLKRKYPLAVGNLESNAHSLITPYDLRETLA 448

  Fly   529 QLLNL-----HNLEADQLQRRSTEMDEPDSTLPRGISLFLPIPAARTCEQAGIAAHWCTCHQRQE 588
            .::.|     .|:|....:.:|    .|.:.||||||||||||..|||:.|.|.:.:|.|.:..|
  Fly   449 DVIALGQLKDANIEVSMKRLQS----HPPNRLPRGISLFLPIPDHRTCDLAHIPSLFCFCRELTE 509

  Fly   589 LQTNDPRVQRAARYLVRLINNRLKDSSQCRTLYLNSILQALIAAPHSKIVKNISTDYAVDITLRL 653
            :.|:|..|.|::|::|..||..:|...|||.|.|..:|.|       ..:......:..::.||:
  Fly   510 VPTDDGLVLRSSRFMVESINQLIKPFGQCRQLKLEMVLLA-------HFLDFGEESFVYELRLRV 567

  Fly   654 QTKPGLGVFESTVRMTGYTTVLTGTISRLNLYGSQSYCLNDPALKMFCYC 703
            :|.||.||:|:|||::. ..:||..|||::.|..||:|:.||.|::||.|
  Fly   568 RTSPGNGVYEATVRLSD-VLLLTSPISRVSHYLGQSHCIGDPDLQIFCLC 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16854NP_001245974.1 DUF229 126..626 CDD:281053 172/532 (32%)
ALP_like 255..533 CDD:293745 106/289 (37%)
CG1428NP_610127.1 DUF229 68..547 CDD:281053 170/523 (33%)
ALP_like 180..453 CDD:293745 106/289 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455759
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JJT
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D306348at33208
OrthoFinder 1 1.000 - - FOG0009974
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10974
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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