DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16854 and CG18088

DIOPT Version :9

Sequence 1:NP_001245974.1 Gene:CG16854 / 34539 FlyBaseID:FBgn0032338 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_001260271.1 Gene:CG18088 / 34219 FlyBaseID:FBgn0032082 Length:663 Species:Drosophila melanogaster


Alignment Length:650 Identity:180/650 - (27%)
Similarity:292/650 - (44%) Gaps:98/650 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 YFVDTTGCRMPHFEVSDDTIAQFIFKPRP-YSCNRA--LIRT--SDTIPGQ-LHLNLEASELLAY 159
            :||.|:.|.:|:.:..:|. |..::||:. .:|:..  ||.|  ::.|... ||::.|.::.|..
  Fly    60 FFVKTSKCHIPYVDPFNDE-AMELYKPQTLITCSNETDLISTTYNEIIKRHILHIDDEVAQKLLN 123

  Fly   160 YNISDLSSVNCNYTEVK--RKTDSSNTHSPAVSFKLDKVM----KLPLSSEFICMWCYDSLDKL- 217
            :...|   .||.|.|:|  :..|:.:      :.|..|..    ::|:..|.:.:.|..:.|.: 
  Fly   124 FTDKD---YNCFYREIKYGKIADTYD------NLKAKKYFTSGYEVPVHVEGMIVECQTADDPIV 179

  Fly   218 -FYKDCHFFAVDKP----RIRPPLKTGTDRVSFNKSKEEQERLSVMILGMDSLSHLNFLRQMRRT 277
             ..||...|...:|    .|||               ....:.||::.|:||||.:|..|.|.:.
  Fly   180 VLQKDAFAFIQHRPLPKDSIRP---------------RAARKPSVIMYGIDSLSRINLRRTMPKV 229

  Fly   278 ANYVRKHLSHVEFWGYNKVGDNTFPNLVPLLSG--LDDQELNLACTPKTLRSYDRCSFIWKRYQQ 340
            .|:::.. ...|..|||||.||:|||::.:|||  ....:.|:..|.|. ...|....|||.::.
  Fly   230 FNFLQGP-GWYEMQGYNKVADNSFPNILAILSGYSASTAKENVCDTDKQ-GCLDEMPMIWKYFKN 292

  Fly   341 LGYRSIFAEDVAMLSAFNYNQNGFRKQPTDYYLRPMIMEMEKTV---AFKKDLNMHLCMGSRRTA 402
            ..|.:.:|||.:..:.|||.:.||.|:|.|||.||::..:|..:   ...:...|..|:|.|...
  Fly   293 ASYLTGYAEDESNSNHFNYLKPGFSKKPMDYYFRPLLRALESEMDVYRLPEHDYMRYCLGRRIAN 357

  Fly   403 DVLLEYMKKLVPRMSRDL-YFSFFWTVALTHDYFNFPSLLDEAMLQQLMQLQDSGLLNRTVVMLL 466
            ..:.:|..:...|...|. .:..||:...:||....||.:.|.:|..|:.:...|.....:::..
  Fly   358 RYIYDYGLQFTKRFVHDRPIWGMFWSNHFSHDDPFMPSAMQEKVLGDLIDMHADGQFEEMIMIFF 422

  Fly   467 SDHGLRWGSFRRTYQGMMEERQPLMMLLYPPWMTERYPEAIANLRLNARRLTTPFDVHATMLQLL 531
            :|||.|:|......:|.:|||.|:|.:..|||..|.||..:..|.||..||::.||:|.|:..::
  Fly   423 ADHGTRFGDLTYLKEGFLEERLPMMFIYLPPWFRETYPSYVRALELNQHRLSSNFDLHNTLKHII 487

  Fly   532 NLHNLEADQLQRRSTEMDEPDS-TLPRGI------SLFLPIPAARTCEQAGIAAHWCTCHQRQEL 589
            .:..              .||. .||:..      |||.|:|..|||.:|||..|||||...:.:
  Fly   488 EIGG--------------TPDGRELPKSFDCPTCQSLFYPLPEGRTCSEAGIEEHWCTCEPYKII 538

  Fly   590 QTND-------PRVQRAARYLVRLINNRLKD-SSQCRTLYLNSILQALIAAP-----HSKIVKNI 641
            ...|       ..:.|...|.|:      |: :|.|..|.||.:.:..|...     |..::::.
  Fly   539 SGQDWTTPIAHSVIDRMNEYFVQ------KNLTSLCSNLTLNYVHKTEIKTGLNIDWHQTLMESE 597

  Fly   642 STDYAVDITLRLQTKPGLGVFESTV---RMTGYTTVLTGTISRLNLYGSQSYCLNDPALKMFCYC 703
            :..|.:    :.:.|.....|::||   ..|....|....|||.|.|...|.|::|...|::|.|
  Fly   598 TAVYRI----KFKVKQNSADFQATVVYHNSTQNAQVNVEKISRTNSYKEDSTCIDDKLAKLYCIC 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16854NP_001245974.1 DUF229 126..626 CDD:281053 153/538 (28%)
ALP_like 255..533 CDD:293745 92/283 (33%)
CG18088NP_001260271.1 DUF229 84..577 CDD:281053 153/538 (28%)
ALP_like 207..489 CDD:293745 92/283 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466453
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JJT
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D31599at6960
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10974
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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