DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16854 and glam-4

DIOPT Version :10

Sequence 1:NP_001245974.1 Gene:CG16854 / 34539 FlyBaseID:FBgn0032338 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_510170.3 Gene:glam-4 / 186918 WormBaseID:WBGene00010521 Length:653 Species:Caenorhabditis elegans


Alignment Length:673 Identity:152/673 - (22%)
Similarity:282/673 - (41%) Gaps:127/673 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 EDHYG------GNVTTAY-FVD---TTG------CRMPHFEVSDDTIAQFIFKPRPYSCNRALIR 138
            |:.||      ||::..| :|:   |.|      |.:|.::|.|:.:..::      :.|:..::
 Worm    34 ENSYGFYQAIVGNLSEKYQYVENKLTIGEDPWDKCVLPKYDVWDEEVMPYV------NPNKNPLK 92

  Fly   139 TSDT--IPGQLHLNLEASELLAYYNISDLSSVNCNYTEVKRKTDSSNTHSPAVSFKLDKVMKL-- 199
            ..||  :|      ..|.:..::..::...::.|......||:|..|        .:.:.|:.  
 Worm    93 NCDTSFVP------FTALQNSSWKIVNTNKNLECRARCHTRKSDRRN--------HIGEWMRTPG 143

  Fly   200 PLSSEFICMWCYDSLDKLFYKDCHFFAVDKPRIRPPLKTGTDRVSFNKSKEEQERLSVMILGMDS 264
            |:..||:...|.:: ::..|...|...:.||.|..|....:..:.|:          |.::.:||
 Worm   144 PVDCEFLEAACSEN-NQDVYGYLHSQVIPKPPIEKPTIDISSLMQFD----------VFVILLDS 197

  Fly   265 LSHLNFLRQMRRTANYVRKHLSHVEFWGYNKVGDNTFPNLVPLLSGLDDQELNLACTPKTL---- 325
            ||:....|.:.||.:|...|:..|.|...||||:|:.||.:|:..|...::::     |||    
 Worm   198 LSYSQGRRALPRTLSYFTNHMDGVIFPYVNKVGENSRPNGIPIWFGKSLEKID-----KTLLDEK 257

  Fly   326 ------------RSY-DRCSFIWKRYQQLGYRSIFAEDVAMLSAFNY-NQNGFRKQPTDYYLRPM 376
                        ::| |..:.::..:...|||::.|||.|. ...|: |..||...|.|:::||.
 Worm   258 VIPPDWPHKYFCKTYKDNETSLFSEFHDYGYRTLLAEDWAD-GTMNWPNCVGFENPPIDHFMRPF 321

  Fly   377 IMEMEK----TVAFKKDLNMHLCMGSRRTADVLLEYMKKLVPRMSRDLYFSFFWTVALTHDYFNF 437
            ....|:    |...:|.||..||   |.|...||:||.:..........|.:.|.:.|.|:..|.
 Worm   322 QNAYERKNHGTSLTQKHLNGKLC---RETHHTLLDYMGQFTKAYPDQRKFGWVWAIDLGHNTENG 383

  Fly   438 PSLLDEAMLQQLMQLQDSGLLNRTVVMLLSDHGLRWGSFRRTYQGMMEERQPLMMLLYPPWMTER 502
            .:..|:.....|::.:.:  |:.:.|.:|.|||||:|..|:|:.|.::...|...|..|. :..:
 Worm   384 FAHADKDFHNYLIKHRKA--LDESFVFILGDHGLRFGDVRKTFVGSLDVNNPFTALSIPK-VLRK 445

  Fly   503 YPEAIANLRLNARRLTTPFDVHATMLQLLNLHNLEADQLQRRSTEMDEPDSTLPR------GISL 561
            ..:.:..:..||:::.:.:|..||:|.::...:..:.            ..|:||      |.|.
 Worm   446 TTKILEIMTENAKQIQSHYDTRATILDIMKYQSANSF------------SETMPREIPGEKGSSY 498

  Fly   562 FLPIPAA-RTCEQAGIAAHWCTCH-QRQELQTNDPRVQRAARYLVRLINNRLKDSSQCRTLYLNS 624
            ....|:. |.|....:...:|.|. ::.:|..|....:...:.|...:|.::.::         :
 Worm   499 IRKQPSTPRNCRNMPVPLQYCICQFKKSKLPRNTTTAESIGKALATAVNTQIAEA---------N 554

  Fly   625 ILQALIAAPHSKIVKNISTD--------YAVDITLRLQTKPGLGVFESTVR-MTGYTTVLTGTIS 680
            ..:..|.....|....::.|        |:|...::   :|....|:..|: |.|...|| |.:.
 Worm   555 FTKMCIKMEWEKTTSLLAYDDKFKGATLYSVTAVMK---EPSNAEFKGNVKIMNGEIKVL-GMVE 615

  Fly   681 RLNLYGSQSYCLNDPALKMFCYC 703
            |.|.||..:.|:.....:.:|||
 Worm   616 RSNKYGKTADCMKSEHHRPYCYC 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16854NP_001245974.1 DUF229 126..626 CDD:397236 118/533 (22%)
glam-4NP_510170.3 DUF229 87..559 CDD:397236 118/529 (22%)

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