DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Samuel and PHC3

DIOPT Version :9

Sequence 1:NP_001260372.1 Gene:Samuel / 34530 FlyBaseID:FBgn0032330 Length:968 Species:Drosophila melanogaster
Sequence 2:XP_005247846.1 Gene:PHC3 / 80012 HGNCID:15682 Length:1011 Species:Homo sapiens


Alignment Length:1032 Identity:180/1032 - (17%)
Similarity:310/1032 - (30%) Gaps:365/1032 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 TTSQLSAPASSASSSSMSSSSAGSTCTTNANTASVAAAYAAFYLEKVKHEKMDNHKDAPMVTIHN 210
            :|:..:.|....||.|.::|   ||.||...|:|                   :....|.:::::
Human    10 STAMDTEPNPGTSSVSTTTS---STTTTTITTSS-------------------SRMQQPQISVYS 52

  Fly   211 NNNNNTIN------NNNSSSSS-----------------SSSIINNHQSSQPSLGHSVKRERLSP 252
            .::.:.:.      :...||::                 ::::...|.||......:..:..||.
Human    53 GSDRHAVQVIQQALHRPPSSAAQYLQQMYAAQQQHLMLHTAALQQQHLSSSQLQSLAAVQASLSS 117

  Fly   253 GSNSSSHNGELT------VSSFARSRSATPSSSSYRG-AGGGAGGGV--------SPSHQQQQQQ 302
            |..|:|..|.:|      .:|...|.|.||:....|. |.....|.:        |.|......|
Human   118 GRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQASSSTSGSITQQTMLLGSTSPTLTASQ 182

  Fly   303 QQQSLQQQQRLSPPSGPSMATATTTSSLSS-----SSSASASASASASAATHMPLHNLSTNLLNS 362
            .|..|:.|..:..|       |||.:::.|     |||:|:|..::|:...::.|.:....:|:|
Human   183 AQMYLRAQMLIFTP-------ATTVAAVQSDIPVVSSSSSSSCQSAATQVQNLTLRSQKLGVLSS 240

  Fly   363 IQQA---AASQQQ----LRSSNSNSSSNIS----GSSNNTKSDGGAASNATDFSTRNYSDIMRCL 416
            .|..   :.||.|    ..:..:.:||.||    ...:|.|.:..:..:.:...||. |.|.:.:
Human   241 SQNGPPKSTSQTQSLTICHNKTTVTSSKISQRDPSPESNKKGESPSLESRSTAVTRT-SSIHQLI 304

  Fly   417 A-AKYNNANPND------------------------------NNATRRNSYYDGSTS---ATTAT 447
            | |.|:...|:.                              ...|.:||..|...|   .....
Human   305 APASYSPIQPHSLIKHQQIPLHSPPSKVSHHQLILQQQQQQIQPITLQNSTQDPPPSQHCIPLQN 369

  Fly   448 GGAGGGGGGAGGSNSAP----SSALKTASSSTGSTTTTAKKLSPSAASAANSAAVSLSKESKVS- 507
            .|.......|...:.:|    .|.|..:.:.:.|...:.....|...|.:.|..:.:..::.:. 
Human   370 HGLPPAPSNAQSQHCSPIQSHPSPLTVSPNQSQSAQQSVVVSPPPPHSPSQSPTIIIHPQALIQP 434

  Fly   508 --AVGGAGVGG--AVASSGGGGSSMSQLAPPPTAPSPTEQ----AKSQMAAVVAAAS--VSPFMT 562
              .|..|...|  ...|:.....:.:||..|...|.|...    ...|.:|:|:...  |||...
Human   435 HPLVSSALQPGPNLQQSTANQVQATAQLNLPSHLPLPASPVVHIGPVQQSALVSPGQQIVSPSHQ 499

  Fly   563 NFLPFSSGIFP---------------PLIDMSSTQALLTLARAVKDAE--IQEILRSKQQRSGSN 610
            .:....|...|               |.:.:.|.|:|......:...:  :|..|.|:::...:.
Human   500 QYSSLQSSPIPIASPPQMSTSPPAQIPPLPLQSMQSLQVQPEILSQGQVLVQNALVSEEELPAAE 564

  Fly   611 ASSPSASAAGTPRSSSTLNAALHQAAQFVTPALIYSAQLQQQQ------QQQQQQHQRQQQQQSQ 669
            |..........|..:..:|..:...|....|..::..|....:      .|.:...:.:..::|.
Human   565 ALVQLPFQTLPPPQTVAVNLQVQPPAPVDPPVGMHLNQCHLHKVFSLKVYQVEDVCEEEMPEESD 629

  Fly   670 HASRQSSPRSTNDSTTVAPIGDGGGGSSIASAAPLDLSSQPPAAKRFKAERRASSTATTATTATT 734
            ...|..   .|....|::|       ::|......||:|:.|..::.:....||.:|:...:.:.
Human   630 ECVRMD---RTPPPPTLSP-------AAITVGRGEDLTSEHPLLEQVELPAVASVSASVIKSPSD 684

  Fly   735 GSSTSTPSPP------------------------------------------------------- 744
            .|..|.|.||                                                       
Human   685 PSHVSVPPPPLLLPAATTRSNSTSMHSSIPSIENKPPQAIVKPQILTHVIEGFVIQEGLEPFPVS 749

  Fly   745 -------------PLEQHDDINS------------------------------------------ 754
                         ||..:..|||                                          
Human   750 RSSLLIEQPVKKRPLLDNQVINSVCVQPELQNNTKHADNSSDTEMEDMIAEETLEEMDSELLKCE 814

  Fly   755 -----GNA------------------------------------NATLGTRSGTGTGESSAAGS- 777
                 |.|                                    |.:||.|....:|...||.. 
Human   815 FCGKMGYANEFLRSKRFCTMSCAKRYNVSCSKKFALSRWNRKPDNQSLGHRGRRPSGPDGAAREH 879

  Fly   778 ------------------------GAGVAKARRRCQAQSE-----------------------EV 795
                                    .|...:.||:.:.:.|                       |.
Human   880 ILRQLPITYPSAEEDLASHEDSVPSAMTTRLRRQSERERERELRDVRIRKMPENSDLLPVAQTEP 944

  Fly   796 NSWSVDDVCGFVGGIDICAEYVQSFRDQSIDGTGLPLLTEDHLVNSLGMKLGPALKL 852
            :.|:||||..|:..:..|.:....||.|.|||..|.||.||||::::.:|||||||:
Human   945 SIWTVDDVWAFIHSLPGCQDIADEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKI 1001

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SamuelNP_001260372.1 SAM_Samd7,11 795..862 CDD:188978 27/58 (47%)
SAM 795..852 CDD:197735 26/56 (46%)
PHC3XP_005247846.1 SAM_Ph1,2,3 942..1010 CDD:188976 28/60 (47%)
SAM 944..1011 CDD:197735 27/58 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12247
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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