DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Samuel and Samd7

DIOPT Version :9

Sequence 1:NP_001260372.1 Gene:Samuel / 34530 FlyBaseID:FBgn0032330 Length:968 Species:Drosophila melanogaster
Sequence 2:NP_083765.2 Gene:Samd7 / 75953 MGIID:1923203 Length:445 Species:Mus musculus


Alignment Length:414 Identity:100/414 - (24%)
Similarity:154/414 - (37%) Gaps:141/414 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   556 SVSPFMTN------FLPFSSGIFPPLIDMSSTQALLTLARAVKDAEIQEILRSKQQRSG-SNASS 613
            |||..:|:      .:|...|  ||::|    :.:|:.:.|..|.. |..:.|:...|| .||:.
Mouse     7 SVSSLLTSGQQKVPMVPSPFG--PPIVD----RDVLSSSIAPTDPS-QFCVPSQFGSSGLPNANM 64

  Fly   614 PSASAAGTPRSS-----------------STLNAAL--HQAAQFVTPALIYSAQLQQQQQQQQQQ 659
            |:      |.||                 :|.|...  |.||:         |:::.....||  
Mouse    65 PN------PLSSHFYSGWGILPPEPIKAVTTRNEMFERHHAAR---------AEMEMYSLYQQ-- 112

  Fly   660 HQRQQQQQSQHASRQSSPRSTNDSTTVAPIGDGGGGSSIASAAPLDLSS---------------- 708
             :|.::...:..|....|.....|....|.|..|..:..||...|..|:                
Mouse   113 -RRMERVNPKGLSGLGIPLFYGSSCLGGPTGFQGRSTLPASDVHLHRSTFRHLQGNPILLATRPH 176

  Fly   709 ------------------QPPAA--KRFK--AERRASSTATTAT--------------------T 731
                              :||.:  :.||  ||.::||...|.:                    .
Mouse   177 FTECWGQKYRLRRGAVYQKPPESDTESFKSQAEEKSSSQMPTLSYEEEEYIKDPDIEVDNQQKPR 241

  Fly   732 ATTGSSTSTPSPPPLEQHD---DINSGNANATLGTRSGTGTGESS-------------------- 773
            ...|..|:.|:.|..|.|.   ..:|..|||.     ..|.|:.|                    
Mouse   242 VADGKPTTVPANPHGELHTHQRKPSSLEANAW-----DDGKGKPSEQVYEGCDGKNGVFRPVSIL 301

  Fly   774 -AAGSGAGVAKARRRCQAQSEEVNSWSVDDVCGFVGGIDICAEYVQSFRDQSIDGTGLPLLTEDH 837
             .:|:...|| .|..|..  .::..|:||||..|:..:..|::|.|.|:|.:|||..||||||.|
Mouse   302 PLSGTHEQVA-LRENCSL--SDIQKWTVDDVYNFIRSLPGCSDYAQVFKDHAIDGETLPLLTEQH 363

  Fly   838 LVNSLGMKLGPALKLRSILAKKLG 861
            |..::|:|||||||::|.:::.:|
Mouse   364 LRGTMGLKLGPALKIQSQVSQHVG 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SamuelNP_001260372.1 SAM_Samd7,11 795..862 CDD:188978 32/67 (48%)
SAM 795..852 CDD:197735 29/56 (52%)
Samd7NP_083765.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..282 21/93 (23%)
SAM_Samd7,11 321..388 CDD:188978 32/67 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..445
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 83 1.000 Domainoid score I8348
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43227
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12247
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.100

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