DRSC/TRiP Functional Genomics Resources

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Protein Alignment Samuel and Samd7

DIOPT Version :10

Sequence 1:NP_525101.2 Gene:Samuel / 34530 FlyBaseID:FBgn0032330 Length:968 Species:Drosophila melanogaster
Sequence 2:NP_001178632.1 Gene:Samd7 / 310257 RGDID:1308931 Length:445 Species:Rattus norvegicus


Alignment Length:396 Identity:98/396 - (24%)
Similarity:159/396 - (40%) Gaps:95/396 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   529 SQLAPP-------PTAPSPTEQAK----SQMAAVVAAASVSPFMTNFLP--FSS--GIFPPLIDM 578
            |...||       |:..:||:.::    ||..:....::.:|   |.||  |.|  ||.||    
  Rat    24 SPFGPPIGDRDALPSTIAPTDPSQFCVPSQFGSSGLPSANTP---NPLPGHFYSGWGILPP---- 81

  Fly   579 SSTQALLT---------LARAVKDAEIQEILRSKQQRSGSNASSPSASAAGTP------------ 622
            ...:|:.|         .|||.     .|:....|||.....:....|..|.|            
  Rat    82 EPIKAVTTRNEMFERHHAARAE-----MEMYSLYQQRRMERVNPKGLSGLGIPLFYGSGCLGGPA 141

  Fly   623 --RSSSTLNAA---LHQAAQF----VTPALIYSAQL------QQQQQQQQQQHQRQQQQQSQHAS 672
              :..|||.|:   :|::. |    ..|.|:.:...      |:.:.::...:|:..:..::...
  Rat   142 GFQGRSTLPASDVHVHRST-FRHLQGNPVLLATRPHFTECWGQKYRLRRGTVYQKPPEIDTESFK 205

  Fly   673 RQSSPRSTNDSTTVAP-----------IG-DGGGGSSIASAAPLDLSSQPPAAKRFKAERRASST 725
            .|:..:|:....| ||           || |......:....|..:.:.|....: ..:|:.||.
  Rat   206 SQADEKSSGQMPT-APYEEEEYIKDPEIGVDNQQEPRVTDGNPTAVLANPHGEPQ-PNQRKPSSM 268

  Fly   726 ATTATTATTGSSTSTPSPPPLEQHDDINSGNANATLGTRSGTGTGESSAAGSGAGVAKARRRCQA 790
            ...|.....|.    ||....|..|:.|.....|:  |....||.|..|......::        
  Rat   269 EAKAWDDGKGE----PSEQGYEGCDEKNGVCLPAS--TLPLPGTQEPVALQENRPLS-------- 319

  Fly   791 QSEEVNSWSVDDVCGFVGGIDICAEYVQSFRDQSIDGTGLPLLTEDHLVNSLGMKLGPALKLRSI 855
               :::.|:||||..|:..:..|::|.|.|:|.:|||..||||||.||..::|:|||||||::|.
  Rat   320 ---DIHKWTVDDVYNFIRSLPGCSDYAQVFKDHAIDGETLPLLTEQHLRGTMGLKLGPALKIQSQ 381

  Fly   856 LAKKLG 861
            :::.:|
  Rat   382 VSQHVG 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SamuelNP_525101.2 SAM_Samd7,11 795..862 CDD:188978 32/67 (48%)
Samd7NP_001178632.1 SAM_Samd7,11 321..388 CDD:188978 32/67 (48%)

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