DRSC/TRiP Functional Genomics Resources

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Protein Alignment Samuel and Samd11

DIOPT Version :10

Sequence 1:NP_525101.2 Gene:Samuel / 34530 FlyBaseID:FBgn0032330 Length:968 Species:Drosophila melanogaster
Sequence 2:XP_006538909.1 Gene:Samd11 / 231004 MGIID:2446220 Length:558 Species:Mus musculus


Alignment Length:506 Identity:128/506 - (25%)
Similarity:185/506 - (36%) Gaps:133/506 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   449 GAGGGGGGAGGSNSAP-----SSALKTASSSTGSTTTTAKKLSPSAA--------SAANSAAVSL 500
            |.|.||...|...|.|     .|:.|.|.|.....|:...:|..:.|        .:|.|.|.|.
Mouse    18 GLGPGGDLLGKRLSCPCITSHCSSEKKARSKDPQATSLLPELESTMAPEDHYHQLMSALSEASSF 82

  Fly   501 SKESKVSAVGGAGVGGAVASSGG----------------------GGSSMSQLAPPPTAPSPTEQ 543
            .:..::..:|....|......||                      |.|.:....|..||....:|
Mouse    83 EETQRLYHLGIPSHGIEPTYQGGPLSPPFSDLLRVRQEVATATLRGPSGLEVHLPSSTADHRRKQ 147

  Fly   544 AKSQM--AAVVAAAS-------------VSPFMTNFLPFSSGIFPPLIDM-------------SS 580
            ...|.  .||.|||:             :||.....:..||.:.||.:.|             .|
Mouse   148 GLVQRREGAVPAAATSFSEREMSQPPPLLSPQNAAHITMSSHLRPPFLGMPTAVCQTPGFSFLPS 212

  Fly   581 TQALLTLAR--------AVKDAEIQEILRSKQQRSGSNASSPSASAA-------------GT--- 621
            .||.: |||        ::...|:.|:||.|:..|......|:...|             |:   
Mouse   213 AQAEM-LARQQELLRKQSLARLEMSELLRQKELGSVHRPLLPAPEVALHIPEGPDELQRRGSMLV 276

  Fly   622 -PRSSSTLNAALHQAAQFVTPALIYSAQLQQQQQQQQQQHQRQQQQQSQHASRQSSPRSTNDSTT 685
             ..||:.|.|...|......|.:            ..::..|.:.::.....:.|.|:.|.    
Mouse   277 LKHSSAPLLALPPQGPPGPGPPI------------PPKESARSRSEKGSLGVQPSQPKETT---- 325

  Fly   686 VAPIGDGGGGSSIASAAPLDLSSQPPAAKRFKAERRASSTATTATTATT-----GSSTSTPSPPP 745
                |.|.....::.....|...:.|..   .|.|..:||.:......|     |..:.:..|||
Mouse   326 ----GAGLWAQEVSEEPSKDSDGEDPET---AAAREGTSTPSQVPAGGTRAEGRGLLSGSTLPPP 383

  Fly   746 LEQHDDINSGNANATLGTRSGTGTGESSAAGSGAGVAKARRRCQAQSEEVNSWSVDDVCGFVGGI 810
            |.......:.:.....||..|..|.|.:..                .|:||.|:|||||.||||:
Mouse   384 LPLGFPCGAVSPYFHTGTMGGLFTDEETTT----------------LEDVNKWTVDDVCNFVGGL 432

  Fly   811 DICAEYVQSFRDQSIDGTGLPLLTEDHLVNSLGMKLGPALKLRSILAKKLG 861
            ..|.||.:.|.:|.|||..||||||:||:|::|:|||||||:|:.:||:||
Mouse   433 SGCGEYARVFGEQGIDGETLPLLTEEHLLNTMGLKLGPALKIRAQVAKRLG 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SamuelNP_525101.2 SAM_Samd7,11 795..862 CDD:188978 42/67 (63%)
Samd11XP_006538909.1 SAM_Samd7,11 417..484 CDD:188978 42/67 (63%)

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