DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Samuel and GPRIN1

DIOPT Version :9

Sequence 1:NP_001260372.1 Gene:Samuel / 34530 FlyBaseID:FBgn0032330 Length:968 Species:Drosophila melanogaster
Sequence 2:NP_443131.2 Gene:GPRIN1 / 114787 HGNCID:24835 Length:1008 Species:Homo sapiens


Alignment Length:1100 Identity:207/1100 - (18%)
Similarity:332/1100 - (30%) Gaps:285/1100 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PAWCYSGNAPTDILQQ---KPAKATTAIV----GGRSAAQPATHDDQEAATTASTATKRKHLERL 70
            |||       ..:||:   .|....||..    |...|...|..|...:...||.|..|...:: 
Human     7 PAW-------LQLLQKDSSPPGPRPTAFFCPQDGSLGAGSSAMRDYCPSQQKASPAPPRHTPDQ- 63

  Fly    71 ASDLRQLGKKGRRSRSVSPCSRYPAVAETARMLSERSLLLSGYGAIESSAKKLSEAATGGAGGGG 135
                    ..|..||..||                                       .|||.|.
Human    64 --------SPGMESRHRSP---------------------------------------SGAGEGA 81

  Fly   136 G---GAAGQAATPTTSQLSAPASSASSSSMSSSSAGSTCTTNANTASVAAAYAAFYLEKVKHEKM 197
            .   |..|..|.|:.:..| |..|.|..::.:..|..:.|..|.|:.....     :..||.|..
Human    82 SCSDGPRGSLACPSPTCFS-PQESPSKETLEAHGASISGTPEATTSGKPEP-----VSSVKTEPK 140

  Fly   198 DNHKDAPMVTIHNNNNNNTINNNNSSSSSSSSIINNHQSS------------QPSL---GHSVKR 247
            .:....||..       ..::..:|..:.|:||......|            :|.:   |..|..
Human   141 SSDDRNPMFL-------EKMDFKSSKQADSTSIGKEDPGSSRKADPMFTGKAEPEILGKGDPVAP 198

  Fly   248 ERLSPGSNSSSHNGEL-TVSSFARSRSATPS-----SSSYRGAGGGAGGGVSPSHQQQQQQQQQS 306
            .|:.|.:......|.| .|.....|::.|.|     ..|.|.....:...|.|...::::.:...
Human   199 GRMDPMTVRKEDLGSLGKVDPLCSSKTYTVSPRKEDPGSLRKVDPVSSDKVDPVFPRKEEPRYSG 263

  Fly   307 LQ---QQQRLSPPS--------------GPS-MATATTTSSLSSSSS-------------ASASA 340
            .:   ..::::|.|              ||| .|......|:.|:|:             .|:..
Human   264 KEHPVSSEKVAPTSAEKVDLVLSGKRDPGPSGKADPMPLESMDSASTGKTEPGLLGKLIPGSSGK 328

  Fly   341 SASASAATHMP--LHNLSTNLL--------NSIQQAAASQQQLR------SSNSNSSSNISGSSN 389
            :...|:.|..|  |..|....|        .:::...|:::..|      .::|.....:||.::
Human   329 NGPVSSGTGAPGSLGRLDPTCLGMADPASVGNVETVPATKEDSRFLGKMDPASSGEGRPVSGHTD 393

  Fly   390 NTKSDGGAASNATDFSTRNYSDIMRCLAAKYNNANPNDNNATRRNSYYDGSTSATTATGGAGGGG 454
            .|      ||..||.::....|.|........:....|...:.:........:...:.|.||...
Human   394 TT------ASAKTDLTSLKNVDPMSSGKVDPVSLGKMDPMCSGKPELLSPGQAERVSVGKAGTVS 452

  Fly   455 GGAGGSNSAPSSALKTASSSTGSTTTTAKKLSPSAASAANSAAVSLSKESKVSAVGGAGVGGAV- 518
            .|    ...|.|:.:....|.||..|:::|::|.::...|..:   |......::|.||...|| 
Human   453 PG----KEDPVSSRREDPISAGSRKTSSEKVNPESSGKTNPVS---SGPGDPRSLGTAGPPSAVK 510

  Fly   519 --ASSGGGGSSMSQ-----LAPPPTAPS--------------PTEQAKSQMAAVVAAASVS---- 558
              .::||.|..:|.     :|....||:              |..:.|:.........|||    
Human   511 AEPATGGKGDPLSSEKAGLVASGKAAPTASGKAEPLAVGKEDPVSKGKADAGPSGQGDSVSIGKV 575

  Fly   559 ---PFMTNFLPFSSGIFPPLIDMSSTQALLTLARAVKDAEIQEILRSKQQRSGSNASSPSASAAG 620
               |..|  :|..||...|:        .|..|.|:.:.::..:...|.....:..:.|.||...
Human   576 VSTPGKT--VPVPSGKVDPV--------SLGKAEAIPEGKVGSLPLEKGSPVTTTKADPRASGKA 630

  Fly   621 TPRSSSTLNAALHQAAQFVTPALIYSAQLQQQQQQQQQQHQRQQQQQSQHASRQSSPRSTNDSTT 685
            .|:|.......|........|....:..|:::..|               ||.:..|.|...:..
Human   631 QPQSGGKAETKLPGQEGAAAPGEAGAVCLKKETPQ---------------ASEKVDPGSCRKAEP 680

  Fly   686 VA-----PIGDGGGGS---------SIASAAPLDLSSQPPAAKRFKAERRASSTATTATTATTGS 736
            :|     |:..|...|         |:....||.|....|::...:.:|:|..:|.:...|....
Human   681 LASGKGEPVSLGKADSAPSRKTESPSLGKVVPLSLEKTKPSSSSRQLDRKALGSARSPEGARGSE 745

  Fly   737 STSTPSPPPLEQHDDINSGNANATLGTRSGTGTGESSAAGSGAGVAKARRRCQAQSEEVNSWSVD 801
            ....|...|:       |....::||.:.....|...:....|.......|.:....:..||...
Human   746 GRVEPKAEPV-------SSTEASSLGQKDLEAAGAERSPCPEAAAPPPGPRTRDNFTKAPSWEAS 803

  Fly   802 ------DVCGFVGGIDICAEYVQSFRDQSIDGTG--------------LPLLTEDHLVNSLGMKL 846
                  :..|...|...|.....|..... ||.|              .|...:..|..|||   
Human   804 APPPPREDAGTQAGAQACVSVAVSPMSPQ-DGAGGSAFSFQAAPRAPSPPSRRDAGLQVSLG--- 864

  Fly   847 GPALKLRSILAKKLGGPCPCVACVAQAQQMLALQTGGAAAATGATAGAGT-----------VTGA 900
              |.:.||:..    ||....|....|...:.::.|.|.||..|......           :|..
Human   865 --AAETRSVAT----GPMTPQAAAPPAFPEVRVRPGSALAAAVAPPEPAEPVRDVSWDEKGMTWE 923

  Fly   901 VAGAGATSATTSCSIKS----EIFNGGSNG------SSSGSSSNQGSDVAAPPAATASSP 950
            |.||.........:|:.    :|...|..|      ::.......||...|||...|..|
Human   924 VYGAAMEVEVLGMAIQKHLERQIEEHGRQGAPAPPPAARAGPGRSGSVRTAPPDGAAKRP 983

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SamuelNP_001260372.1 SAM_Samd7,11 795..862 CDD:188978 17/86 (20%)
SAM 795..852 CDD:197735 15/76 (20%)
GPRIN1NP_443131.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..859 176/965 (18%)
GRIN_C 873..1005 CDD:291888 23/114 (20%)
Interaction with GNAO1. /evidence=ECO:0000250 899..1008 16/84 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 943..986 9/40 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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