DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup154 and NUP157

DIOPT Version :9

Sequence 1:NP_001285827.1 Gene:Nup154 / 34527 FlyBaseID:FBgn0021761 Length:1365 Species:Drosophila melanogaster
Sequence 2:NP_011031.1 Gene:NUP157 / 856842 SGDID:S000000907 Length:1391 Species:Saccharomyces cerevisiae


Alignment Length:1423 Identity:312/1423 - (21%)
Similarity:561/1423 - (39%) Gaps:323/1423 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 DYDYQSLSFLKSDRTHNLQ-----QMRTVTKSAIPNEILEHFKHIKCHCTMGLFPEIGRAWLTID 109
            ||..:.|.:..||....|.     |.:.||.  ||:|:|....:.:....||:|.|:...|:|.|
Yeast   115 DYYSKGLDYNFSDEVGGLGAFTPFQRQQVTN--IPDEVLSQVSNTEIKSDMGIFLELNYCWITSD 177

  Fly   110 SEIYIWTFNQTRDVAYYDGLSHLIVSVGLVKPKPGVFVQDVKYLLVLTTPIEVIVLGVTFGESSY 174
            :::.:|..|.:.:....|.:.|.|:.|.||||.|..||..|:.||::.|..::.:|.::|.:.::
Yeast   178 NKLILWNINNSSEYHCIDEIEHTILKVKLVKPSPNTFVSSVENLLIVATLFDIYILTISFNDRTH 242

  Fly   175 NEMQLMNRPVFVIGTD-NVSISVIKGTDDGRIFL-GGRDGC-LYEIYYQAESSWFGKRCKKI--- 233
             |:.:.|..:.|..|. ||| ::|.....|:||. |..||. ::|:.|....:.|..:..||   
Yeast   243 -ELNIFNTGLKVNVTGFNVS-NIISYERTGQIFFTGATDGVNVWELQYNCSENLFNSKSNKICLT 305

  Fly   234 --NLSQGLVSYMVPS------FLKVF-----SEVDPIEHIEIDNSRKLLYVLTEKGVIEAWDIST 285
              ||:..|.:.::||      ..||.     :|.:.|..:|:|.||.:|:.|:.|.::.::.|::
Yeast   306 KSNLANLLPTKLIPSIPGGKLIQKVLEGDAGTEEETISQLEVDQSRGVLHTLSTKSIVRSYLITS 370

  Fly   286 SYTTA---------RR----LGRITQNDITNQAVSLITTVDPSIFKSVKAICPLSADDADKLHLV 337
            :....         ||    ||......::|:|           ||..| |..:|..:.:.|.|.
Yeast   371 NGLVGPVLIDAAHIRRGMNALGVKNSPLLSNRA-----------FKIAK-IVSISMCENNDLFLA 423

  Fly   338 AVTQCGVRLFF-------STTSLNVKQ-QFGP-AVPCSPGENTGF--GQPAVQPPLSPNAEAP-- 389
            .:|..||||:|       |..||.:.. :|.| ::..|..:|..|  |    ..||:.:...|  
Yeast   424 VITTTGVRLYFKGSISRRSIGSLKLDSVKFPPTSISSSLEQNKSFIIG----HHPLNTHDTGPLS 484

  Fly   390 -------------------KGLYLLHVRLPPGYTPNATTNKPKQVHAAHYTEGTMLMITTQQHEQ 435
                               .|:|...||              |:.::...::|.......:..|:
Yeast   485 TQKASSTYINTTCASTIISPGIYFTCVR--------------KRANSGELSKGITNKALLENKEE 535

  Fly   436 DLLWSLSSAPSV----NFTYLVESTAL----ESLDGVVWGLAEVHEPSTPQRKSPLNSARHAR-- 490
            ..|:  .|||..    |:...||:|||    :.:..:|......:..||||..:.:.:::::.  
Yeast   536 HKLY--VSAPDYGILKNYGKYVENTALLDTTDEIKEIVPLTRSFNYTSTPQGYANVFASQYSAEP 598

  Fly   491 -KVALLTNQGTHIIEVLKMVDVLRQILLSCNGPHHEEVKMFFQSQNQREACVTALLLATSDTYRG 554
             |||:||:....|.......:|...::        |....|..|....|||.|||.||       
Yeast   599 LKVAVLTSNALEIYCYRTPDEVFESLI--------ENPLPFIHSYGLSEACSTALYLA------- 648

  Fly   555 SDVALWAAQAFMLYGGEPCYQHQKFLNASNRNMANQTLGPNTTNVRERQSMFMSTPMPNSVANSP 619
                              |    || |.|.             :::.....|.|..:|..|...|
Yeast   649 ------------------C----KF-NKSE-------------HIKSSALAFFSAGIPGVVEIKP 677

  Fly   620 VGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSRMLHSVWQMRCV------- 677
            .....|....|||.  |:    ...|.|...||.|.:..|..:.::|:...:|:.|..       
Yeast   678 KSSRESGSVPPISQ--NL----FDKSGECDGIVLSPRFYGSALLITRLFSQIWEERVFVFKRASK 736

  Fly   678 ---NEQFCSNLSQSECALLLSDLRSLRSFLEVHSVHDISSTTRVSFDNHLDRTNSYNTIMMGNTL 739
               .:.|..::::.:....||.:..|..|..:|         |.||.:.:....| |.|      
Yeast   737 TEKMDAFGISITRPQVEYYLSSISVLADFFNIH---------RPSFVSFVPPKGS-NAI------ 785

  Fly   740 LPIPEQRVLSEQAQVEETRSLSALNLFVKHACEVISLWNIL--NSHSFQLICVQL-------SPE 795
                       .|...|:.:::||.|.:....:.:||.|:.  :..:|:.:...|       ..:
Yeast   786 -----------TASDAESIAMNALILLINSIKDALSLINVFYEDIDAFKSLLNTLMGAGGVYDSK 839

  Fly   796 HQKLLTCSTFRDLLITRS---EVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHEDDVTY 857
            .::......|.||....:   ::...::|.::|..:........:...|:|...:.....|.:.|
Yeast   840 TREYFFDLKFHDLFTPNAKTKQLIKEILIEVVNANIASGTSADYIVNVLKERFGSFCHSADILCY 904

  Fly   858 KATELLMNAKNCTSATEKEHMLRTTL---HMCKEAAPTLPLHSICMQFISADFFEGVIELSAVCA 919
            :|.|.|       .|.:|..|:.:.:   |:    ...:.|:..|.:.|.......|:::  :..
Yeast   905 RAGEHL-------EAAQKFEMIDSKISRNHL----DTAIDLYERCAENIELCELRRVVDI--MVK 956

  Fly   920 SKSDPEEVG--VHFYNNGEPADDREGY------TCFATRMAYYKEVQL--MLDHIYQRVCNKTHV 974
            ....|:.||  :.|.:..:..:..:.|      |....::.|.|.:.:  ::..|.:.|.:.|.:
Yeast   957 LNYQPKTVGFLLRFADKIDKGNQAQEYVSRGCNTADPRKVFYDKRINVYTLIFEIVKSVDDYTSI 1021

  Fly   975 -QDKSINPLKGTAKASDAKNGATQTIPKIVAHTLKVKDPLIHITLYEWLLAHDMLKELLDVVEPS 1038
             |..||..:...:.||..|.       ::.:..:...:...|...|:||:|:.....||.:....
Yeast  1022 EQSPSIANISIFSPASSLKK-------RVYSVIMNSNNRFFHYCFYDWLVANKRQDYLLRLDSQF 1079

  Fly  1039 LGEFLRRSVSQNVDNVVLIDLLWKYYEKNSHHSQAAHILDNLAMTRSENINLEQRIEYLVRAVMC 1103
            :..:|:....::::   :.:|||.|..|..|..:||.:|..|| :...::.|.:|||.|.||   
Yeast  1080 VLPYLKERAEKSLE---ISNLLWFYLFKEEHFLEAADVLYALA-SSDFDLKLSERIECLARA--- 1137

  Fly  1104 MRNGNVGSSLSNG-----IFLKE-LEDKLDIARVQKSVLAAM---TELASDKLEAATAVKELNYA 1159
              ||...||.|..     :.|.| :.:..|||.:|..:|..:   |.:..|..:..|.  :||..
Yeast  1138 --NGLCDSSTSFDQKPALVQLSENIHELFDIASIQDDLLNLVRNETRIDEDYRKQLTL--KLNGR 1198

  Fly  1160 LYDITQLYQHFAEPFDLWECQLSILNCSHHNDPLLIESVWGQIINSVVDKP----GTTSERCNRL 1220
            :..::.|:...|:|.|.:|.:|.|...|...|..:|:..|.::::|:.:.|    |:..:. :.|
Yeast  1199 VLPLSDLFNDCADPLDYYEIKLRIFKVSQFKDEKVIQGEWNRLLDSMKNAPSPDVGSVGQE-SFL 1262

  Fly  1221 FTKIEILVR---EYGESGVCFPFAFLIREL-----------EVKACQLRFPEGIVPEKLVSMNLD 1271
            .:....|:|   ...::.|.||..||:.::           :...|.:....|:...||      
Yeast  1263 SSISNTLIRIGKTTRDTDVVFPVHFLMNKILESFIDKSSAADGSVCSMFLLAGVSHLKL------ 1321

  Fly  1272 IELLLEYY--SRMISMNERVWANEGNEWHLIQSVIRVVSLLADNAQSIWYRSKRRIVG 1327
                  ||  ||:|         |.:|.::..:...:|.|:.|     ||:|...:.|
Yeast  1322 ------YYILSRII---------ENSEGNVELAKKEMVWLIKD-----WYQSDSDLRG 1359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup154NP_001285827.1 Nucleoporin_N 66..502 CDD:312364 128/515 (25%)
Nucleoporin_C <1018..1139 CDD:308677 37/126 (29%)
NUP157NP_011031.1 NUP170 73..1391 CDD:227624 312/1423 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344026
Domainoid 1 1.000 129 1.000 Domainoid score I1146
eggNOG 1 0.900 - - E1_COG5308
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 244 1.000 Inparanoid score I677
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55643
OrthoFinder 1 1.000 - - FOG0004471
OrthoInspector 1 1.000 - - otm46552
orthoMCL 1 0.900 - - OOG6_102040
Panther 1 1.100 - - O PTHR10350
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R808
SonicParanoid 1 1.000 - - X3168
TreeFam 1 0.960 - -
1413.790

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