DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL9 and RPL9B

DIOPT Version :9

Sequence 1:NP_001285826.1 Gene:RpL9 / 34526 FlyBaseID:FBgn0015756 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_014332.1 Gene:RPL9B / 855658 SGDID:S000005011 Length:191 Species:Saccharomyces cerevisiae


Alignment Length:189 Identity:90/189 - (47%)
Similarity:129/189 - (68%) Gaps:2/189 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKEL 65
            |:.|.:.|.::||:.:..|:|:|:|.:.|.||||.::.||:.:.....:.:.:||....|.:|.:
Yeast     1 MKYIQTEQQIEIPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGDRKHV 65

  Fly    66 AAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPI--NCVTSENNTVIEIRNFLGEKYIRRVEMAP 128
            ||:|||.|.::|||.|||.|::||||.|||||||  |.|..:....||:|||||:|.||.|.:..
Yeast    66 AALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRD 130

  Fly   129 GVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVK 187
            |||:..||..|||:::.||.:|.||.:||.:||...|:||||||||||:|||.|..:|:
Yeast   131 GVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFIVE 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL9NP_001285826.1 Ribosomal_L6 1..189 CDD:421973 90/189 (48%)
RPL9BNP_014332.1 Ribosomal_L6 1..190 CDD:421973 90/189 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346792
Domainoid 1 1.000 83 1.000 Domainoid score I1935
eggNOG 1 0.900 - - E1_COG0097
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H90855
Inparanoid 1 1.050 175 1.000 Inparanoid score I980
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62200
OrthoFinder 1 1.000 - - FOG0001024
OrthoInspector 1 1.000 - - otm46927
orthoMCL 1 0.900 - - OOG6_100791
Panther 1 1.100 - - LDO PTHR11655
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1146
SonicParanoid 1 1.000 - - X698
TreeFam 1 0.960 - -
1514.790

Return to query results.
Submit another query.