DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL9 and AT1G33120

DIOPT Version :9

Sequence 1:NP_001285826.1 Gene:RpL9 / 34526 FlyBaseID:FBgn0015756 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_564417.1 Gene:AT1G33120 / 840208 AraportID:AT1G33120 Length:194 Species:Arabidopsis thaliana


Alignment Length:194 Identity:105/194 - (54%)
Similarity:137/194 - (70%) Gaps:5/194 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYM---PD--KRTLKVEKWFG 60
            |:||.|::.:.||..:...|.|:|:.:.|.||.|.|.||||.||..:   |:  |:.||::.|||
plant     1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKIDSWFG 65

  Fly    61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVE 125
            |:|..|::||..||::|:|.|||.||:||||.||||||||.....:...||||||||||.:|:||
plant    66 TRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVE 130

  Fly   126 MAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVKLE 189
            |..|||:|.|...|||::::|||||.||.|.|||.|...||.|||||||||:|||||:.:|:.|
plant   131 MLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKSKIVEEE 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL9NP_001285826.1 Ribosomal_L6 1..189 CDD:421973 104/192 (54%)
AT1G33120NP_564417.1 Ribosomal_L6 1..194 CDD:421973 104/192 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 99 1.000 Domainoid score I2386
eggNOG 1 0.900 - - E1_COG0097
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H90855
Inparanoid 1 1.050 206 1.000 Inparanoid score I1278
OMA 1 1.010 - - QHG62200
OrthoDB 1 1.010 - - D1408258at2759
OrthoFinder 1 1.000 - - FOG0001024
OrthoInspector 1 1.000 - - otm2443
orthoMCL 1 0.900 - - OOG6_100791
Panther 1 1.100 - - O PTHR11655
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X698
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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