DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL9 and rpl-9

DIOPT Version :9

Sequence 1:NP_001285826.1 Gene:RpL9 / 34526 FlyBaseID:FBgn0015756 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001370400.1 Gene:rpl-9 / 176071 WormBaseID:WBGene00004420 Length:189 Species:Caenorhabditis elegans


Alignment Length:186 Identity:115/186 - (61%)
Similarity:144/186 - (77%) Gaps:0/186 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKEL 65
            |:.|.||..|..|:.:..:||.|:|.:||.|||:::.|:||.::|....|.||:|.||||.:|||
 Worm     1 MKLIESNDTVVFPEGVTFTVKNRIVHVTGPRGTIRKDFRHLHMEMERIGKSTLRVRKWFGVRKEL 65

  Fly    66 AAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGV 130
            ||:|||||||:|||||||.||:||||:||||||||....:.|..:|||||||||.:|||.:..||
 Worm    66 AAIRTVCSHIKNMIKGVTVGFRYKMRSVYAHFPINVTLQDGNRTVEIRNFLGEKIVRRVPLPEGV 130

  Fly   131 TVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
            ....|||||||::|||||::.||.:||.|||||.||.|||||||||:|||||||:|
 Worm   131 IATISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEKDIRKFLDGIYVSEKTTIV 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL9NP_001285826.1 Ribosomal_L6 1..189 CDD:421973 115/186 (62%)
rpl-9NP_001370400.1 Ribosomal_L6 1..186 CDD:421973 114/184 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167878
Domainoid 1 1.000 104 1.000 Domainoid score I4226
eggNOG 1 0.900 - - E1_COG0097
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H90855
Inparanoid 1 1.050 240 1.000 Inparanoid score I2106
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62200
OrthoDB 1 1.010 - - D1408258at2759
OrthoFinder 1 1.000 - - FOG0001024
OrthoInspector 1 1.000 - - oto19691
orthoMCL 1 0.900 - - OOG6_100791
Panther 1 1.100 - - LDO PTHR11655
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1146
SonicParanoid 1 1.000 - - X698
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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