DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aub and AGO10

DIOPT Version :10

Sequence 1:NP_476734.1 Gene:aub / 34524 FlyBaseID:FBgn0000146 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_199194.1 Gene:AGO10 / 834403 AraportID:AT5G43810 Length:988 Species:Arabidopsis thaliana


Alignment Length:994 Identity:230/994 - (23%)
Similarity:387/994 - (38%) Gaps:196/994 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NP-VIARGRGRGRKPNNVEANRGFAPSLGQKSDPSHSEGNQASGGNGGG-----GDAQVGPSI-- 62
            || .:..|:.....|:.|........:..|.|.||....|::...|.||     ||..:.||.  
plant    25 NPKTVQNGKIPPPSPSPVTVTTPATVTQSQASSPSPPSKNRSRRRNRGGRKSDQGDVCMRPSSRP 89

  Fly    63 ------EKSSLSAVQM----------HKSEGDPRGSVRGRRLITDLVYSRPPGMTSKKGVVGTHI 111
                  .:::.|||.:          |:.:...|.:..         ::..||.    |.:||..
plant    90 RKPPPPSQTTSSAVSVATAGEIVAVNHQMQMGVRKNSN---------FAPRPGF----GTLGTKC 141

  Fly   112 TVQANYFKVLKRPNWTIYQYRVDFTPDVEATRLRRSFLYE-----HKGILGGYI--FDGTNM--- 166
            .|:||:| :...|...:.||.|..||:|.:..:.|:.:.|     .:..||..:  :||...   
plant   142 IVKANHF-LADLPTKDLNQYDVTITPEVSSKSVNRAIIAELVRLYKESDLGRRLPAYDGRKSLYT 205

  Fly   167 -----FCINQF--KAVQDSPYVLELVTKSRAGENIEIKIKA-----------VGSVQSTDAEQFQ 213
                 |...:|  |.|.:...::....:.|: ..:.||..|           .|.......|..|
plant   206 AGELPFTWKEFSVKIVDEDDGIINGPKRERS-YKVAIKFVARANMHHLGEFLAGKRADCPQEAVQ 269

  Fly   214 VLNLILRRAMEGLDLKL---VSRYYYDPQAKI------NLENFRMQLWPGYQTSIRQHENDILLC 269
            :|:::||.    |.:|.   |.|.::.|..|.      .||:     |.|:..|||..:..:.|.
plant   270 ILDIVLRE----LSVKRFCPVGRSFFSPDIKTPQRLGEGLES-----WCGFYQSIRPTQMGLSLN 325

  Fly   270 SEICHKVMRTETL-----------YNILSDAIRDSDDYQSTFKRAVMGMVILTDYN---NKTYRI 320
            .::..... .|.|           .::||..:.|||  :...|:.:.|:.:...:.   .:.||:
plant   326 IDMASAAF-IEPLPVIEFVAQLLGKDVLSKPLSDSD--RVKIKKGLRGVKVEVTHRANVRRKYRV 387

  Fly   321 DDVDFQSTPLCKFKTNDG--EISYVDYYKKRYNIIIRDLKQPLVMSRPTDKNIRGGNDQAIMIIP 383
            ..:..|.|....|..::.  ..|.::|:::.|...|:....|.         ::.||.:....:|
plant   388 AGLTTQPTRELMFPVDENCTMKSVIEYFQEMYGFTIQHTHLPC---------LQVGNQKKASYLP 443

  Fly   384 -ELAR-ATGMTDAMRADFRTLRAMSEHTRLNP-DRRIERLRMFNKRLKSCKQSVETLKSWNIELD 445
             |..: ..|.....|.:.:.:.|:.:.|...| ||..:.||...   .:........|.:.:.:.
plant   444 MEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTVQ---HNAYDQDPYAKEFGMNIS 505

  Fly   446 SALVEIPARVLPPEKILF---GNQKIFVCDARADWTNEFRTCSMFKNVHINRWYVITPSRNLRET 507
            ..|..:.||:||...:.:   |.:|..:... ..|  ......|...:.::||..:..||:::|.
plant   506 EKLASVEARILPAPWLKYHENGKEKDCLPQV-GQW--NMMNKKMINGMTVSRWACVNFSRSVQEN 567

  Fly   508 ------QEFVQMCIRTASSMKMN--ICNPIYEEIPDD----RNGTYSQAIDNAAANDPQIVMVVM 560
                  .|..|||  ..|.|:.|  ...|||...||.    ....|..:::.....:.::::.::
plant   568 VARGFCNELGQMC--EVSGMEFNPEPVIPIYSARPDQVEKALKHVYHTSMNKTKGKELELLLAIL 630

  Fly   561 RSPNEEKYSCIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVIQMNAKLMGAPWQVV- 624
            ...|...|..:|:....:..:.||....|.:....::      ....|.:::|.|:.|....:| 
plant   631 PDNNGSLYGDLKRICETELGLISQCCLTKHVFKISKQ------YLANVSLKINVKMGGRNTVLVD 689

  Fly   625 -----IPL-HGLMTV--GFDVCHSPKN---KNKSYGAFVATMDQKESFRYFSTVNEHIKGQELSE 678
                 ||| ..:.|:  |.||.| |:|   .:.|..|.||:.|..|..:|...|......|||.:
plant   690 AISCRIPLVSDIPTIIFGADVTH-PENGEESSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQ 753

  Fly   679 QMSVNMACALR-------------SYQEQHRSLPERILFFRDGVGDGQLYQVVNSEVNTLKDRLD 730
            .:.......:|             |:::.....|.||:|:||||.:||.|||:..|       ||
plant   754 DLYKTWQDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYE-------LD 811

  Fly   731 EIYKSAGKQE---GCRMTFIIVSKRINSRYF-TGHR---------NPVPGTVVDDVITLPERYDF 782
            .|.|:....|   ...:|||:|.||.::|.| ..||         |.:||||||..|..|..:||
plant   812 AIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKNSTDRSGNILPGTVVDTKICHPTEFDF 876

  Fly   783 FLVSQAVRIGTVSPTSYNVISDNMGLNADKLQMLSYKMTHMYYNYSGTIRVPAVCHYAHKLAF-- 845
            :|.|.|...||..|..|:|:.|.....||.:|.|:..:.:.|...:.::.:....:|||..||  
plant   877 YLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA 941

  Fly   846 ---LVAESINRAPSAGLQN 861
               |..|.:....|.|.:|
plant   942 RFYLEPEIMQDNGSPGKKN 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aubNP_476734.1 PAZ_piwi_like 272..392 CDD:239211 24/137 (18%)
Piwi_piwi-like_Euk 400..849 CDD:240016 129/507 (25%)
AGO10NP_199194.1 PLN03202 131..988 CDD:215631 208/879 (24%)

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