DRSC/TRiP Functional Genomics Resources

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Protein Alignment aub and ago2

DIOPT Version :10

Sequence 1:NP_476734.1 Gene:aub / 34524 FlyBaseID:FBgn0000146 Length:866 Species:Drosophila melanogaster
Sequence 2:XP_009292643.1 Gene:ago2 / 570630 ZFINID:ZDB-GENE-110606-6 Length:898 Species:Danio rerio


Alignment Length:859 Identity:192/859 - (22%)
Similarity:363/859 - (42%) Gaps:172/859 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 GVVGTHITVQANYFKVLKRPNWTIYQYRVDFTPDVEATRLRRSFLYEH------KGILGGY--IF 161
            |.:|..|.:|||:|: ::.|...:|.|.:|..|:....|:.|. :.||      ..|.|..  ::
Zfish    46 GTMGRTIKLQANFFE-MEIPKLEVYHYEIDIKPEKCPRRVNRE-IVEHMVQHFKTQIFGDRKPVY 108

  Fly   162 DG-TNMFCINQFKAVQDSPYVLEL-VTKSRAGENIEIKI--------------KAV-GSVQSTDA 209
            || .|::........:|.   :|| ||....|::...|:              :|: |.:.:...
Zfish   109 DGRKNLYTAMPLPIGRDK---VELEVTIPGEGKDRSFKVAIKWMSCVSLQALHEALSGRLPNIPF 170

  Fly   210 EQFQVLNLILRRAMEGLDLKLVSRYYYDP-QAKINLENFRMQLWPGYQTSIRQHENDILLCSEIC 273
            |..|.|::::|. :..:....|.|.::.| :...|......::|.|:..|:|.....::|..::.
Zfish   171 ETIQALDVVMRH-LPSMRYTPVGRSFFTPSEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVS 234

  Fly   274 ----HKVMRT-ETLYNILS-DAIRD-----SDDYQSTFKRAVMGMVILTDY---NNKTYRIDDV- 323
                :|.... |.:..:|. .:|.:     :|..:..|.:.:.|:.:...:   ..:.||:.:| 
Zfish   235 ATAFYKAQPVIEFMCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYRVCNVT 299

  Fly   324 ----DFQSTPLCKFKTNDGEISYVDYYKKRYNIIIRDLKQPLVMSRPTDKNIRGGNDQAIMIIP- 383
                ..|:.||.:......|.:...|:|.:|.:::|....|.         ::.|.:|....:| 
Zfish   300 RRPASHQTFPLQQENGQTIECTVAQYFKDKYKLVLRYPHLPC---------LQVGQEQKHTYLPL 355

  Fly   384 ELARATGMTDAMR--ADFRTLRAMSEHTRLNPDRRIERLRMFNKRLKSCKQSVET-LKSWNIELD 445
            |:.........::  .|.:|...:....|..|||:.|    .:|.::|...:.:. ::.:.:.:.
Zfish   356 EVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQDE----ISKLMRSANFNTDPYVREFGVMVR 416

  Fly   446 SALVEIPARVLPPEKILFGNQKIFVCDARAD-WTN------------------------EFRTCS 485
            ..:.|:..|||....||:|. ::.:..|:.. |.|                        :.|...
Zfish   417 DDMTEVNGRVLQAPSILYGG-RVRISSAQLSIWLNPCLIWSCLWLFQNKAIATPVQGVWDMRNKQ 480

  Fly   486 MFKNVHINRWYV--ITPSRNLRE--TQEFVQMCIRTASSMKMNI------CNPIYEEIPDDRNGT 540
            ....:.|..|.:  ..|.|...|  .:.|.....:.:....|.|      |.             
Zfish   481 FHTGIEIKVWAIACFAPQRQCTELLLKAFTDQLRKISRDAGMPIQGQPCFCK------------- 532

  Fly   541 YSQAIDNAAANDP------------QIVMVVM--RSPNEEKYSCIKKRTCVDRPVPSQVVTLKVI 591
            |:|..|:.   :|            |:|:|::  ::|   .|:.:|:.......:.:|.|.:|.:
Zfish   533 YAQGADSV---EPMFKHLKYTYQGLQLVVVILPGKTP---VYAEVKRVGDTVLGMATQCVQVKNV 591

  Fly   592 APRQQKPTGLMSIATKVVIQMNAKLMGAPWQVVIP-------LHGLMTVGFDVCHSP--KNKNKS 647
              ::..|..|.::..|:    |.||.|.. .:::|       ...::.:|.||.|.|  ..|..|
Zfish   592 --QKTTPQTLSNLCLKI----NVKLGGVN-NILLPQGRPLVFQQPVIFLGADVTHPPAGDGKKPS 649

  Fly   648 YGAFVATMDQKESFRYFSTVNEHIKGQELSEQMSVNMACALRSYQEQHRSLPERILFFRDGVGDG 712
            ..|.|.:||...| ||.:||......|::.:.::..:...|..:.:..|..|.||:::|||:.:|
Zfish   650 IAAVVGSMDAHPS-RYCATVRVQQHRQDIIQDLATMVRELLIQFYKSTRFKPTRIIYYRDGISEG 713

  Fly   713 QLYQVVNSEVNTLKD---RLDEIYKSAGKQEGCRMTFIIVSKRINSRYFTGHRNP-------VP- 766
            |..||:..|:..:::   :|::.|     |.|  :||::|.||.::|.|...||.       :| 
Zfish   714 QFNQVLQHELLAIREACIKLEKDY-----QPG--ITFVVVQKRHHTRLFCMDRNERVGKSGNIPA 771

  Fly   767 GTVVDDVITLPERYDFFLVSQAVRIGTVSPTSYNVISDNMGLNADKLQMLSYKMTHMYYNYSGTI 831
            ||.||..||.|..:||:|.|.|...||..|:.|:|:.|:....:|:||:|:|::.|.|...:.::
Zfish   772 GTTVDTKITHPFEFDFYLCSHAGIQGTSRPSHYHVLWDDNHFTSDELQVLTYQLCHTYVRCTRSV 836

  Fly   832 RVPAVCHYAHKLAF 845
            .:||..:|||.:||
Zfish   837 SIPAPAYYAHLVAF 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aubNP_476734.1 PAZ_piwi_like 272..392 CDD:239211 23/139 (17%)
Piwi_piwi-like_Euk 400..849 CDD:240016 125/516 (24%)
ago2XP_009292643.1 ArgoN 106..180 CDD:465134 15/76 (20%)
ArgoL1 190..240 CDD:462567 9/49 (18%)
PAZ_argonaute_like 241..361 CDD:239212 22/128 (17%)
Piwi_ago-like 406..856 CDD:240015 117/480 (24%)

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