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Protein Alignment aub and ago2

DIOPT Version :10

Sequence 1:	NP_476734.1	Gene:	aub / 34524	FlyBaseID:	FBgn0000146	Length:	866	Species:	Drosophila melanogaster
Sequence 2:	NP_001004877.1	Gene:	ago2 / 448205	XenbaseID:	XB-GENE-1001916	Length:	871	Species:	Xenopus tropicalis

Alignment Length:	853	Identity:	198/853 - (23%)
Similarity:	362/853 - (42%)	Gaps:	153/853 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    94 YSRPPGMTSKKGVVGTHITVQANYFKVLKRPNWTIYQYRVDFTPDVEATRLRRSFLYEH-----K 153
            |:..|......|..|..|.:|||:|: :..|...||.|.:|..|:....|:.|. :.||     |
Frog    23 YTFKPPPRPDFGTSGRTIKLQANFFE-MDIPKIEIYHYEIDIKPEKCPRRVNRE-IVEHMVQHFK 85

  Fly   154 GILGG---YIFDG-TNMFCINQFKAVQDSPYVLELVTKSRAGENI-EIKIKAV------------ 201
            ..:.|   .:||| .|::........:|....||:.......:.| ::.||.:
Frog    86 AQIFGDRKPVFDGRKNLYTAMPLPIARDKQVELEVTLPGEGKDRIFKVAIKWMACVSLQALHDAL 150

  Fly   202 -GSVQSTDAEQFQVLNLILRRAMEGLDLKLVSRYYYD-PQAKINLENFRMQLWPGYQTSIRQHEN 264
             |.:.|...|..|.|::::|. :..:....|.|.::. .:...|......::|.|:..|:|....
Frog   151 SGRLPSVPFETIQALDVVMRH-LPSMRYTPVGRSFFTASEGCANPLGGGREVWFGFHQSVRPSLW 214

  Fly   265 DILLCSEIC----HKVMRT-ETLYNILS-DAIRD-----SDDYQSTFKRAVMGMVILTDY---NN 315
            .::|..::.    :|.... |.:..:|. .:|.:     :|..:..|.:.:.|:.:...:   ..
Frog   215 KMMLNIDVSATAFYKAQPVIEFMCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMK 279

  Fly   316 KTYRIDDV-----DFQSTPLCKFKTNDGEISYVDYYKKRYNIIIRDLKQPLVMSRPTDKNIRGGN 375
            :.||:.:|     ..|:.||.:......|.:...|:|.|:.:::|....|.         ::.|.
Frog   280 RKYRVCNVTRRPASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPC---------LQVGQ 335

  Fly   376 DQAIMIIP-ELARATGMTDAMR--ADFRTLRAMSEHTRLNPDRRIERLRMFNKRLKSCKQSVET- 436
            :|....:| |:.........::  .|.:|...:....|..|||:.|    .:|.::|...:.:.
Frog   336 EQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEE----ISKLMRSASFNTDPF 396

  Fly   437 LKSWNIELDSALVEIPARVLPPEKILFGNQ----------KIFVCDARADWTNEFRTCSMFKNVH 491
            ::.:.|.:...:.::..|||.|..||:|.:          |......:..|  :.|.......:.
Frog   397 VREFGIMVKDDMTDVTGRVLQPPSILYGGRVWEEPNAPLNKAIATPVQGVW--DMRNKQFHTGIE 459

  Fly   492 INRWYV--ITPSRNLRET--QEFVQMCIRTASSMKMNI------CNPIYEEIPDDRNGTYSQAID 546
            |..|.:  ..|.|...|.  :.|.:...:.:....|.|      |.             |:|..|
Frog   460 IKVWAIACFAPQRQCTEVHLKTFTEQLRKISRDAGMPIQGQPCFCK-------------YAQGAD 511

  Fly   547 NAAANDP------------QIVMVVM--RSPNEEKYSCIKKRTCVDRPVPSQVVTLKVIAPRQQK 597
            :.   :|            |:|:|::  ::|   .|:.:|:.......:.:|.|.:|.:  ::..
Frog   512 SV---EPMFRHLKNTYTGLQLVVVILPGKTP---VYAEVKRVGDTVLGMATQCVQMKNV--QRTT 568

  Fly   598 PTGLMSIATKVVIQMNAKLMGAPWQVVIP-------LHGLMTVGFDVCHSP--KNKNKSYGAFVA 653
            |..|.::..|:    |.||.|.. .:::|       ...::.:|.||.|.|  ..|..|..|.|.
Frog   569 PQTLSNLCLKI----NVKLGGVN-NILLPQGRPPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVG 628

  Fly   654 TMDQKESFRYFSTVNEHIKGQELSEQMSVNMACALRSYQEQHRSLPERILFFRDGVGDGQLYQVV 718
            :||...: ||.:||......||:.:.:|..:...|..:.:..|..|.||:|:||||.:||..||:
Frog   629 SMDAHPN-RYCATVRVQQHRQEIIQDLSAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVL 692

  Fly   719 NSEVNTLKD---RLDEIYKSAGKQEGCRMTFIIVSKRINSRYFTGHRNP-------VP-GTVVDD 772
            :.|:..:::   :|::.|     |.|  :|||:|.||.::|.|...||.       :| ||.||.
Frog   693 HHELLAIREACIKLEKDY-----QPG--ITFIVVQKRHHTRLFCTDRNERVGKSGNIPAGTTVDT 750

  Fly   773 VITLPERYDFFLVSQAVRIGTVSPTSYNVISDNMGLNADKLQMLSYKMTHMYYNYSGTIRVPAVC 837
            .||.|..:||:|.|.|...||..|:.|:|:.|:...::|:||:|:|::.|.|...:.::.:||..
Frog   751 KITHPSEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPA 815

  Fly   838 HYAHKLAF 845
            :|||.:||
Frog   816 YYAHLVAF 823

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.