DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aub and AGO2

DIOPT Version :9

Sequence 1:NP_476734.1 Gene:aub / 34524 FlyBaseID:FBgn0000146 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_730054.1 Gene:AGO2 / 39683 FlyBaseID:FBgn0087035 Length:1217 Species:Drosophila melanogaster


Alignment Length:1007 Identity:214/1007 - (21%)
Similarity:388/1007 - (38%) Gaps:249/1007 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GRGRGRKPNNVEANRGFAPSLGQKSDPSHSEGNQASGG----------NGG---------GGDAQ 57
            |..:||:  ..|......|| ||:.. .|.:|.|...|          .||         ||..|
  Fly   308 GHQQGRQ--GQEGGYQQRPS-GQQQG-GHQQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGGYQQ 368

  Fly    58 VGPSIEKSSLSAVQMHKSEGDPRGSVRGRRLITDLVYSRPPGMTSKKGVVGTHITVQANY--FKV 120
            ..|..:.:...:...::|.|.|:     ::....|.....|..:.|:|.:|....|..||  ..:
  Fly   369 RPPGQQPNQTQSQGQYQSRGPPQ-----QQQAAPLPLPPQPAGSIKRGTIGKPGQVGINYLDLDL 428

  Fly   121 LKRPNWTIYQYRVDFTPDVEATRLRRSFLYEHKGILGGYI--FDG-TNMFCINQFKAVQDSPYVL 182
            .|.|: ..|.|.|...|:......|::|.......|||.:  :|| .:.:.:::......:|   
  Fly   429 SKMPS-VAYHYDVKIMPERPKKFYRQAFEQFRVDQLGGAVLAYDGKASCYSVDKLPLNSQNP--- 489

  Fly   183 ELVTKSRAGENIE--IKIKAVGSVQSTDAEQFQV-LNLIL----RRAMEGLDLKL---------- 230
            |:....|.|..:.  |:||..|. .:.|.:.... :|..:    .|||:.:::.|          
  Fly   490 EVTVTDRNGRTLRYTIEIKETGD-STIDLKSLTTYMNDRIFDKPMRAMQCVEVVLASPCHNKAIR 553

  Fly   231 VSRYYYDPQAKINLENFRMQLWPGYQTSIRQHENDIL-----LCSEICHK-----VMRTETLYNI 285
            |.|.::    |::..|.|.:|..||:..:..::..:|     |..:|.||     :...|.|...
  Fly   554 VGRSFF----KMSDPNNRHELDDGYEALVGLYQAFMLGDRPFLNVDISHKSFPISMPMIEYLERF 614

  Fly   286 -LSDAIRDSD--DYQSTFKRAVM-GM-VILTDYNN-----KTYRIDDVDFQSTPLCKFKTNDGEI 340
             |...|.::.  ||...|....: |: |:.|...:     :.||::.:.........|:.:..::
  Fly   615 SLKAKINNTTNLDYSRRFLEPFLRGINVVYTPPQSFQSAPRVYRVNGLSRAPASSETFEHDGKKV 679

  Fly   341 SYVDYYKKRYNIIIRDLKQPLVMSRPTDKNIRGGNDQAIMIIPEL-----ARATGMTDAMRADFR 400
            :...|:..|        ..||...:....|: |.:.::|::..||     .:|....|.......
  Fly   680 TIASYFHSR--------NYPLKFPQLHCLNV-GSSIKSILLPIELCSIEEGQALNRKDGATQVAN 735

  Fly   401 TLRAMSEHTRLNPDRRIERLRMFNKRLKSCKQSVETLKSWNIELDSALVEIPARVLPPEKILFGN 465
            .::..:..|.:...:.:..|:.|...|.      .|:..:.|.:.:..:.:..|||.|.::.:.:
  Fly   736 MIKYAATSTNVRKRKIMNLLQYFQHNLD------PTISRFGIRIANDFIVVSTRVLSPPQVEYHS 794

  Fly   466 QK---------------------------IFVCDARADWTNEFRTCSMFKNVHINRWYVITPSRN 503
            ::                           :..||.|:                         .|.
  Fly   795 KRFTMVKNGSWRMDGMKFLEPKPKAHKCAVLYCDPRS-------------------------GRK 834

  Fly   504 LRETQ--EFVQMCIRTASSMKMNICNPI-YEEIPDDRNGTYSQAIDNAAA------NDPQIVMV- 558
            :..||  :|..:.|....::.:::.:.: |....||     .:::|...|      :|..||:: 
  Fly   835 MNYTQLNDFGNLIISQGKAVNISLDSDVTYRPFTDD-----ERSLDTIFADLKRSQHDLAIVIIP 894

  Fly   559 -------VMRSPNEEKY----SCIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVIQM 612
                   .::...|.::    .|||:.| |:|...:|.:                   ..:::::
  Fly   895 QFRISYDTIKQKAELQHGILTQCIKQFT-VERKCNNQTI-------------------GNILLKI 939

  Fly   613 NAKLMGAPWQVV----IP-LHGLMTVGFDVCH-SPKNKN-KSYGAFVATMDQKESFRYFSTVNEH 670
            |:||.|...::.    :| :...|.:|.||.| ||..:. .|.....|:.|.     |.::.|..
  Fly   940 NSKLNGINHKIKDDPRLPMMKNTMYIGADVTHPSPDQREIPSVVGVAASHDP-----YGASYNMQ 999

  Fly   671 IKGQ-----ELSEQMSVNMACALRSYQEQHRSLPERILFFRDGVGDGQLYQVVNSEVNTLKDRLD 730
            .:.|     |:.:..|:.:. .||.|:|...:.|:.|:::||||.|||..::.|.|:..:|...|
  Fly  1000 YRLQRGALEEIEDMFSITLE-HLRVYKEYRNAYPDHIIYYRDGVSDGQFPKIKNEELRCIKQACD 1063

  Fly   731 EIYKSAGKQEGC--RMTFIIVSKRINSRYF------TGHR--NPVPGTVVDDVITLPERYDFFLV 785
            ::        ||  ::..:||.||.::|:|      |.::  |..||||||..|..|....||:|
  Fly  1064 KV--------GCKPKICCVIVVKRHHTRFFPSGDVTTSNKFNNVDPGTVVDRTIVHPNEMQFFMV 1120

  Fly   786 SQAVRIGTVSPTSYNVISDNMGLNADKLQMLSYKMTHMYYNYSGTIRVPAVCHYAHKLAF----- 845
            |.....||..||.||||.:...|:.|.||.|:|.:.||:...:.::..||..:.||.:|.     
  Fly  1121 SHQAIQGTAKPTRYNVIENTGNLDIDLLQQLTYNLCHMFPRCNRSVSYPAPAYLAHLVAARGRVY 1185

  Fly   846 ---------LVAESINR--APSAGLQNQLYFL 866
                     |..|...|  .|....:|.:||:
  Fly  1186 LTGTNRFLDLKKEYAKRTIVPEFMKKNPMYFV 1217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aubNP_476734.1 ArgoN 105..219 CDD:293095 28/121 (23%)
PAZ_piwi_like 272..392 CDD:239211 26/139 (19%)
Piwi_piwi-like_Euk 400..849 CDD:240016 115/532 (22%)
AGO2NP_730054.1 PLN03202 411..1180 CDD:215631 182/856 (21%)
ArgoN 411..543 CDD:293095 31/136 (23%)
ArgoL1 554..601 CDD:285861 13/50 (26%)
PAZ 605..719 CDD:239207 22/122 (18%)
Piwi_ago-like 764..1186 CDD:240015 110/485 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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