DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aub and Piwil1

DIOPT Version :10

Sequence 1:NP_476734.1 Gene:aub / 34524 FlyBaseID:FBgn0000146 Length:866 Species:Drosophila melanogaster
Sequence 2:XP_017453899.1 Gene:Piwil1 / 363912 RGDID:1306980 Length:863 Species:Rattus norvegicus


Alignment Length:885 Identity:325/885 - (36%)
Similarity:498/885 - (56%) Gaps:56/885 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ARGRGRGRKPNNVE--------ANRGFAPSLGQKSDPSHSE----GNQAS---GGNGGGGDAQVG 59
            ||.|||.|....|:        ...|:.|...|:| |:..:    |.|..   |......:.|:.
  Rat     7 ARARGRARGQETVQHVGAAAQSQQPGYIPPRPQQS-PTEGDLVGRGRQRGMVVGATSKSQELQIS 70

  Fly    60 PSIEKSSLSAVQMHKSEGDPRGSVRGRRLITDLVYSRPPGM----TSKKGVVGTHITVQANYFKV 120
            ...::.||:          .||.  .||...||..:....:    .||.|..|..:.:..|:|::
  Rat    71 AGFQELSLA----------ERGG--RRRDFHDLGVNTRQNLDHVKESKTGSSGIIVKLSTNHFRL 123

  Fly   121 LKRPNWTIYQYRVDFTPDVEATRLRRSFLYEHKGILGG-YIFDGTNMFCINQFKAVQDSPYVLEL 184
            ..||.|.:|||.:|:.|.:||.|||.:.|::|:.::|. :.||||.:|..   |.:|..  |.|:
  Rat   124 TSRPQWALYQYHIDYNPLMEARRLRSALLFQHEDLIGRCHAFDGTILFLP---KRLQHK--VTEV 183

  Fly   185 VTKSRAGENIEIKIKAVGSVQSTDAEQFQVLNLILRRAMEGLDLKLVSRYYYDPQAKINLENFRM 249
            .:::|.||::.|.|.....:..|.....|..|:|.||.::.::|:.:.|.||:|...|::.|.|:
  Rat   184 FSQTRNGEHVRITITLTNELPPTSPTCLQFYNIIFRRLLKIMNLQQIGRNYYNPSDPIDIPNHRL 248

  Fly   250 QLWPGYQTSIRQHENDILLCSEICHKVMRTETLYNILSDAIRDSDD--YQSTFKRAVMGMVILTD 312
            .:|||:.|||.|:||:|:||:::.|||:|:||:.:.:.:..:.:::  :|....:.::|:::||.
  Rat   249 VIWPGFTTSILQYENNIMLCTDVSHKVLRSETVLDFMFNLYQQTEEHKFQEQVSKELIGLIVLTK 313

  Fly   313 YNNKTYRIDDVDFQSTPLCKFKTNDG-EISYVDYYKKRYNIIIRDLKQPLVMSRPTDKNIRGGN- 375
            |||||||:||:|:...|...||..|| |:|:::||:|:||..|.|||||:::|:|..:...||. 
  Rat   314 YNNKTYRVDDIDWDQNPKSTFKKADGSEVSFLEYYRKQYNQEITDLKQPVLVSQPKRRRGPGGTL 378

  Fly   376 DQAIMIIPELARATGMTDAMRADFRTLRAMSEHTRLNPDRRIERLRMFNKRLKSCKQSVETLKSW 440
            ....|:||||...||:||.||.||..::.::.||||.|::|...:......:.........|:.|
  Rat   379 PGPAMLIPELCYLTGLTDKMRNDFNVMKDLAVHTRLTPEQRQREVGRLIDYIHKDDNVQRELRDW 443

  Fly   441 NIELDSALVEIPARVLPPEKILFGNQKIFVCDARADWTNEFRTCSMFKNVHINRWYVITPSRNLR 505
            .:..||.|:....|:|..|||..|.:........|||:.|.|...:.....::.|.:|...||..
  Rat   444 GLSFDSNLLSFSGRILQSEKIHQGGKTFDYNPQFADWSKETRGAPLISVKPLDNWLLIYTRRNYE 508

  Fly   506 ETQEFVQMCIRTASSMKMNICNPIYEEIPDDRNGTYSQAIDNAAANDPQIVMVVMRSPNEEKYSC 570
            .....:|...:...:|.:.:...|..|: |||...|.:|:.....:|.|||:.::.|..::||..
  Rat   509 AANSLIQNLFKVTPAMGIQMKKAIMIEV-DDRTEAYLRALQQKVTSDTQIVVCLLSSNRKDKYDA 572

  Fly   571 IKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVIQMNAKLMGAPWQVVIPLHGLMTVGF 635
            |||..|.|.|.|||.|..:.:..:|.    :|:||||:.:|||.|:.|..|:|.:||...|.||.
  Rat   573 IKKYLCTDCPTPSQCVVARTLGKQQT----VMAIATKIALQMNCKMGGELWRVDMPLKLAMIVGI 633

  Fly   636 DVCHSPKNKNKSYGAFVATMDQKESFRYFSTVNEHIKGQELSEQMSVNMACALRSYQEQHRSLPE 700
            |..|......:|...|||::::..: |:||......:||||.:.:.|.:..|||::...:..:|.
  Rat   634 DCYHDTTAGRRSIAGFVASINEGMT-RWFSRCVFQDRGQELVDGLKVCLQAALRAWSGCNEYMPS 697

  Fly   701 RILFFRDGVGDGQLYQVVNSEVNTLKDRLDEIYKSAGKQEGCRMTFIIVSKRINSRYF--TGHR- 762
            |::.:|||||||||..:||.||....|.|    ||.|:....|:|.|:|.||:|:|:|  :|.| 
  Rat   698 RVIVYRDGVGDGQLKTLVNYEVPQFLDCL----KSVGRGYNPRLTVIVVKKRVNARFFAQSGGRL 758

  Fly   763 -NPVPGTVVDDVITLPERYDFFLVSQAVRIGTVSPTSYNVISDNMGLNADKLQMLSYKMTHMYYN 826
             ||:||||:|..:|.||.||||:||||||.|:||||.||||.|:.||..|.:|.|:||:.|:|||
  Rat   759 QNPLPGTVIDVEVTRPEWYDFFIVSQAVRSGSVSPTHYNVIYDSSGLKPDHIQRLTYKLCHVYYN 823

  Fly   827 YSGTIRVPAVCHYAHKLAFLVAESINRAPSAGLQNQLYFL 866
            :.|.|||||.|.|||||||||.:||:|.|:..|.|:||:|
  Rat   824 WPGVIRVPAPCQYAHKLAFLVGQSIHREPNLSLSNRLYYL 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aubNP_476734.1 PAZ_piwi_like 272..392 CDD:239211 49/123 (40%)
Piwi_piwi-like_Euk 400..849 CDD:240016 175/452 (39%)
Piwil1XP_017453899.1 GAGE 16..108 CDD:461753 20/104 (19%)
ArgoL1 230..277 CDD:462567 22/46 (48%)
PAZ 279..417 CDD:198017 55/137 (40%)
Piwi_piwi-like_Euk 403..846 CDD:240016 175/452 (39%)

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