DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aub and rde-1

DIOPT Version :9

Sequence 1:NP_476734.1 Gene:aub / 34524 FlyBaseID:FBgn0000146 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_741611.1 Gene:rde-1 / 179393 WormBaseID:WBGene00004323 Length:1020 Species:Caenorhabditis elegans


Alignment Length:909 Identity:178/909 - (19%)
Similarity:314/909 - (34%) Gaps:305/909 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 FKVLKRPNWTIYQYRVDFTPDVE---ATRLRRSFLYEHKGIL----------------------- 156
            :|.||    .:...:|.:.|.|.   ..:..::|:|::..||                       
 Worm   186 YKFLK----NVMTQKVRYAPFVNEEIKVQFAKNFVYDNNSILRVPESFHDPNRFEQSLEVAPRIE 246

  Fly   157 ---GGYI-----FDGTNM--FCINQFKAVQDSP------YVLELVTKSRAGENIEIKIKAVGSVQ 205
               |.||     |||..:  |.|.. |...::|      |:|.:|......:::...:|.     
 Worm   247 AWFGIYIGIKELFDGEPVLNFAIVD-KLFYNAPKMSLLDYLLLIVDPQSCNDDVRKDLKT----- 305

  Fly   206 STDAEQFQVLNLILRRAMEGLDLKLVSRYYYDPQAKINLENFRM---QLWPGYQTSI-RQHENDI 266
                           :.|.|   |:..|....|:.:..|||.::   ::|....:.: .:|...:
 Worm   306 ---------------KLMAG---KMTIRQAARPRIRQLLENLKLKCAEVWDNEMSRLTERHLTFL 352

  Fly   267 LLCSEICHKVMRTETLYNIL--SDAIRDSDDYQST-FKRAVMGMVILTDYNNKTYRIDDVDFQST 328
            .||.|       ...:|.:.  ||..|::..|.:| ||        :.:.|.|.     ::|...
 Worm   353 DLCEE-------NSLVYKVTGKSDRGRNAKKYDTTLFK--------IYEENKKF-----IEFPHL 397

  Fly   329 PLCKFKTNDGE----ISYVDY------YKKRYNIIIRDLKQPLVMSRPTDKNIRGGNDQAIMIIP 383
            ||.|.|:...|    :.:::.      ||.|.:::::|........:|.|.     .:..:.::.
 Worm   398 PLVKVKSGAKEYAVPMEHLEVHEKPQRYKNRIDLVMQDKFLKRATRKPHDY-----KENTLKMLK 457

  Fly   384 ELARATGMTDAMRADFRTLRAMSEHTRLNPDRRIERLRMFNKRLKSCKQSVETLKSWNIELDSAL 448
            ||            ||.:                |.|. |.:|...|.:             ..:
 Worm   458 EL------------DFSS----------------EELN-FVERFGLCSK-------------LQM 480

  Fly   449 VEIPARVLP-----------------------------PEKIL----------FGNQKIFVCDAR 474
            :|.|.:||.                             |||.|          .||..:...|..
 Worm   481 IECPGKVLKEPMLVNSVNEQIKMTPVIRGFQEKQLNVVPEKELCCAVFVVNETAGNPCLEENDVV 545

  Fly   475 ADWTNEFRTCSMFKNVHI----NR-----WYVITPSRNLRETQEFVQMCIRTASSMKMNI----C 526
            ..:|.....|. |:.:.|    ||     .|..|     :....|.:.|.......:..|    .
 Worm   546 KFYTELIGGCK-FRGIRIGANENRGAQSIMYDAT-----KNEYAFYKNCTLNTGIGRFEIAATEA 604

  Fly   527 NPIYEEIPDDRNGTYSQAIDNAAANDPQIVMVVMRSPNE------EKYSCIKKRTCVDRPVPSQV 585
            ..::|.:||               .:.:::|.::.|..:      .|:.|.......::.:.|:.
 Worm   605 KNMFERLPD---------------KEQKVLMFIIISKRQLNAYGFVKHYCDHTIGVANQHITSET 654

  Fly   586 VTLKVIAPRQQKPTGLMSIATKVVIQMNAKLMG----APWQVV-------------IPLHGLMTV 633
            ||..:.:.|.:|  |...|..::.:::||||.|    ..|..:             :||  .|.|
 Worm   655 VTKALASLRHEK--GSKRIFYQIALKINAKLGGINQELDWSEIAEISPEEKERRKTMPL--TMYV 715

  Fly   634 GFDVCH--SPKNKNKSYGAFVATMDQKES-FRYFSTVNEHIK--------GQELSEQMSVNMACA 687
            |.||.|  |....:.|..|.||:::...: :|......|..:        |:|.::.:.......
 Worm   716 GIDVTHPTSYSGIDYSIAAVVASINPGGTIYRNMIVTQEECRPGERAVAHGRERTDILEAKFVKL 780

  Fly   688 LRSYQEQH-RSLPERILFFRDGVGDGQLYQVVNSEVNTLKDRLDEIYKSA-GKQEGCRMTFIIVS 750
            ||.:.|.: ...|..|:.:||||.|.::.:|.:.|:.:||..:.:..... |:....:.|||::.
 Worm   781 LREFAENNDNRAPAHIVVYRDGVSDSEMLRVSHDELRSLKSEVKQFMSERDGEDPEPKYTFIVIQ 845

  Fly   751 KRINSRYF--------------------------------------TGHRNPVPGTVVDDVITLP 777
            ||.|:|..                                      ||..||..||.||.:|...
 Worm   846 KRHNTRLLRRMEKDKPVVNKDLTPAETDVAVAAVKQWEEDMKESKETGIVNPSSGTTVDKLIVSK 910

  Fly   778 ERYDFFLVSQAVRIGTVSPTSYNVISDNMGLNADKLQMLSYKMTHMYYNYSGTIRVPAVCHYAH 841
            .::||||.|....:||..|..|.|:.|:.|::.|::..::|.:..:.......|.:|...||||
 Worm   911 YKFDFFLASHHGVLGTSRPGHYTVMYDDKGMSQDEVYKMTYGLAFLSARCRKPISLPVPVHYAH 974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aubNP_476734.1 ArgoN 105..219 CDD:293095 24/142 (17%)
PAZ_piwi_like 272..392 CDD:239211 24/132 (18%)
Piwi_piwi-like_Euk 400..849 CDD:240016 115/568 (20%)
rde-1NP_741611.1 PAZ_argonaute_like 280..419 CDD:239212 33/181 (18%)
Piwi_ago-like 467..982 CDD:240015 113/547 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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