DRSC/TRiP Functional Genomics Resources

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Protein Alignment aub and alg-2

DIOPT Version :10

Sequence 1:NP_476734.1 Gene:aub / 34524 FlyBaseID:FBgn0000146 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_871992.1 Gene:alg-2 / 173468 WormBaseID:WBGene00000106 Length:910 Species:Caenorhabditis elegans


Alignment Length:943 Identity:212/943 - (22%)
Similarity:366/943 - (38%) Gaps:219/943 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PSLGQKS------DPSHSEGNQASGGNGGGGDAQVGPSIEKSSLSAVQMHKSEGDPRGSVRGRRL 88
            |.||:.|      |...|......||......:|:|                 |...|:: |.:.
 Worm    10 PRLGKLSIFEMPGDSLTSSSFMPDGGAETSSSSQLG-----------------GSAHGAI-GTKP 56

  Fly    89 ITDLVYSRPPGMTSKKGVVGTHITVQANYFKVLKRPNWTIYQYRVDFTPDVEATRLRRSFLYEHK 153
            ...:.:..|  :....||.|..|.::||:|.| :.|..::..|::|..||....|:.|..:    
 Worm    57 DAGVQFQCP--VRPNHGVEGRSILLRANHFAV-RIPGGSVQHYQIDVFPDKCPRRVNREVI---- 114

  Fly   154 GIL----GGY------IFDGTNMFCINQFKAVQDSP--YVLELVTKSRAGENIEIKIKAVGS--- 203
            |.|    ..|      ::||.......:...:...|  :.:.|...|.......:.:|.:|.   
 Worm   115 GCLISSFSKYFTNIRPVYDGKRNMYTREPLPIGTEPMNFEVTLPGDSAVERKFSVTMKWIGQVCL 179

  Fly   204 ----------VQSTDAEQFQVLNLILRRAMEGLDLKLVSRYYYDPQA--KINLENFR-------M 249
                      |:....|..|.:::|||. :..|....|.|.::.|..  |..::..:       .
 Worm   180 SALDDAMEGRVRQVPHEAVQSIDVILRH-LPSLKYTPVGRSFFTPPGVMKPGMQMHQESKLGGGR 243

  Fly   250 QLWPGYQTSIRQHENDILLCSEIC----HKVMRT--------ETLYNILSDAIRDSDDYQSTFKR 302
            ::|.|:..|:|..:..::|..::.    ::.|..        |.....|::....||..:..|.:
 Worm   244 EVWFGFHQSVRPSQWKMMLNIDVSATAFYRAMPVIEFVAEVLELPVQALAERRALSDAQRVKFTK 308

  Fly   303 AVMGMVI-LTDYN--NKTYRIDDV-----DFQSTPLCKFKTNDG-EISYVDYYKKRYNIIIRDLK 358
            .:.|:.| :|...  .:.||:.:|     ..|:.|| :.:|... |.:...|:..:|.|   .||
 Worm   309 EIRGLKIEITHCGAVRRKYRVCNVTRRPAQTQTFPL-QLETGQTIECTVAKYFFDKYRI---QLK 369

  Fly   359 QPLVMSRPTDKNIRGGNDQAIMIIPELARATGMTDAMR-----ADFRTLRAMSEHTRLNPDRRIE 418
            .|.:..      ::.|.:|....:|  .....:....|     .|.:|...:....|..|:|..|
 Worm   370 YPHLPC------LQVGQEQKHTYLP--PEVCDIVPGQRCLKKLTDVQTSTMIKATARSAPERERE 426

  Fly   419 RLRMFNKRLKSCKQSVETLKSWNIELDSALVEIPARVLPPEKILFG----------NQKIFVCDA 473
            ..::.:|...|......   .:.|.::.|:.|:..|||...|:|:|          ||.::  |.
 Worm   427 ICKLVSKAELSADPFAH---EFGITINPAMTEVKGRVLSAPKLLYGGRHRATTALPNQGVW--DM 486

  Fly   474 RADWTNEFRTCSMFKNVHINRWYVITPSRNLRETQEFVQMCIRTASSMKMNICNPIYEEIPDDRN 538
            |.   .:|.|     .:.:..|.:               .|....|.:|.|.......::     
 Worm   487 RG---KQFHT-----GMEVRTWAI---------------ACFAQQSHVKENDLRMFTTQL----- 523

  Fly   539 GTYSQAIDNAAANDPQIVMVVMRSPNEEKYSCIKKRTCVDRPVP---------SQVVTLKVIAP- 593
                |.|...|.      |.::.:|...||:     :.|::..|         |.:..:.|:.| 
 Worm   524 ----QRISTDAG------MPIIGTPMFCKYA-----SGVEQVEPMFKYLKQTYSAIQLIVVVLPG 573

  Fly   594 -----RQQKPTG--LMSIATKVV-----------------IQMNAKLMGAPWQVVIP-------L 627
                 .:.|..|  ::.|||:.|                 ::||.||.|.. .:::|       .
 Worm   574 KTPIYAEVKRVGDTVLGIATQCVQAKNAIRTTPQTLSNLCLKMNVKLGGVN-SILLPNVRPRIFN 637

  Fly   628 HGLMTVGFDVCH--SPKNKNKSYGAFVATMDQKESFRYFSTVNEHIKGQELSEQMSVNMACALRS 690
            ..::.:|.|:.|  :...:..|..|.|.:||...| ||.:||......||:...::..:...|..
 Worm   638 EPVIFLGCDITHPAAGDTRKPSIAAVVGSMDAHPS-RYAATVRVQQHRQEIITDLTYMVRELLVQ 701

  Fly   691 YQEQHRSLPERILFFRDGVGDGQLYQVVNSEVNTLKDRLDEIYKSAGKQEGCRMTFIIVSKRINS 755
            :....|..|.||:.:||||.:|||:.|:..|:..:::..  :...:|.|.|  :|||.|.||.::
 Worm   702 FYRNTRFKPARIVVYRDGVSEGQLFNVLQYELRAIREAC--VMLESGYQPG--ITFIAVQKRHHT 762

  Fly   756 RYFTGHR--------NPVPGTVVDDVITLPERYDFFLVSQAVRIGTVSPTSYNVISDNMGLNADK 812
            |.|...:        |..|||.||..||.|..:||||.|.|...||..|:.|:|:.|:..|.||:
 Worm   763 RLFAADKADQVGKAFNIPPGTTVDVGITHPTEFDFFLCSHAGIQGTSRPSHYHVLWDDNDLTADE 827

  Fly   813 LQMLSYKMTHMYYNYSGTIRVPAVCHYAHKLAF 845
            ||.|:|:|.|.|...:.::.:||..:|||.:||
 Worm   828 LQQLTYQMCHTYVRCTRSVSIPAPAYYAHLVAF 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aubNP_476734.1 PAZ_piwi_like 272..392 CDD:239211 26/140 (19%)
Piwi_piwi-like_Euk 400..849 CDD:240016 129/507 (25%)
alg-2NP_871992.1 ArgoN 75..205 CDD:465134 25/134 (19%)
ArgoL1 215..273 CDD:462567 9/57 (16%)
PAZ_argonaute_like 274..395 CDD:239212 26/132 (20%)
Piwi_ago-like 440..866 CDD:240015 122/475 (26%)

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