DRSC/TRiP Functional Genomics Resources

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Protein Alignment aub and prg-1

DIOPT Version :9

Sequence 1:NP_476734.1 Gene:aub / 34524 FlyBaseID:FBgn0000146 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_492121.1 Gene:prg-1 / 172515 WormBaseID:WBGene00004178 Length:824 Species:Caenorhabditis elegans


Alignment Length:895 Identity:275/895 - (30%)
Similarity:444/895 - (49%) Gaps:108/895 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IARGRGRGRKPNNVEANRGFAPSLGQKSDPSHSEGNQASGGNGGGGDAQVGPSIEKSSLSAVQMH 73
            :|.|.||||       .||                   ||.|..||.       ::..|..:|  
 Worm     1 MASGSGRGR-------GRG-------------------SGSNNSGGK-------DQKYLGTIQ-- 30

  Fly    74 KSEGDPRGSVRGRRLITDLVYSRPPGMTSKKGVVGTHITVQANYFKV-LKRPNWTIYQYRVDFTP 137
                            .|| :.|..|. ||.|..|......||:..: :.:.:::||||.|:|.|
 Worm    31 ----------------PDL-FIRQQGQ-SKTGSSGQPQKCFANFIPIEMTQSDYSIYQYHVEFEP 77

  Fly   138 DVEATRLRRSFLYEHK---GILGGYIFDGTNMFCINQFKAVQDSPYVLEL---VTKSRAGENIEI 196
            .|::...|...|.::.   .|...::|||..::...:::..|    ::|:   :.:|.    |.|
 Worm    78 TVDSKANREKMLRDNNVTDEIGHHFVFDGMILYLKEEWEQNQ----MIEVQHPIDRSL----ICI 134

  Fly   197 KIKAVGSVQSTDAEQFQVLNLILRRAMEGLDLKLVSRYYYDPQAKINLENFRMQLWPGYQTSIRQ 261
            :.|........|.:...:.|.|:||:.:.|.|..:.|.|::......:.::.|.:.|||:|:||.
 Worm   135 RFKQTNRFLVDDPQTINIFNTIIRRSFDALQLTQLGRNYFNWGDSRAVPDYNMSILPGYETAIRM 199

  Fly   262 HENDILLCSEICHKVMRTETLYNILSDAIRDSDD----YQSTFKRAVMGMVILTDYNNKTYRIDD 322
            :|.:.:||.|...|::|.|::|.:....:|...:    .|........|..|:|.||||.:|...
 Worm   200 YEENFMLCVENRFKMVREESMYILFHKELRSCQNNPQRVQEKMNEMYGGTTIITRYNNKLHRYTR 264

  Fly   323 VDFQSTPLCKFKTNDGEISYVDYYKKRYNIIIRDLKQPLVMSRPTDKNIRGGNDQAIMIIPELAR 387
            :|:..:||.:|..:...|:..:|:|.:|.|.|....||:::|....|. .|...|...|:|||..
 Worm   265 LDYSISPLSEFVKDGQSITLKEYFKNQYGIEITVDDQPIIISEGKPKQ-PGEPPQVSYIVPELCF 328

  Fly   388 ATGMTDAMRADFRTLRAMSEHTRLNPDRRIERLRMFNKRLKSCKQSVETLKSWNIELDSALVEIP 452
            .||:||.||.||:.::.:::|||::|.:|:...|.....|...::.:|..|.|.|.|...|..:.
 Worm   329 PTGLTDEMRKDFKMMKEIAKHTRMSPQQRLVESRKLIVDLSKNEKVMECFKYWGISLGQDLANVQ 393

  Fly   453 ARVLPPE-----KILFGNQKIFVCDARADWTNEFRTCSMFKNVHINRWYVITPSRNLRE--TQEF 510
            ||||..|     |...|.|        |:|....:.|.:::..::..|.||.|......  :|:|
 Worm   394 ARVLKSEPLQGKKTYEGKQ--------AEWARGVKECGIYRGSNMTNWIVIGPGSGNSGLLSQKF 450

  Fly   511 VQMCIRTASSMKMNI----CNPIYEEIPDDRNGTYSQAIDNAAANDPQIVMVVMRSPNEEKYSCI 571
            ::...|....:::.:    |.||....|:|.......||......|..:::|::...|:.:|..:
 Worm   451 IEEARRLGKILQVQLGEPMCVPIRGISPNDYLEGVKGAIKQVDGEDIHMLVVMLADDNKTRYDSL 515

  Fly   572 KKRTCVDRPVPSQVVTLKVIAPRQQ---KPTGLMSIATKVVIQMNAKLMGAPWQVVIPLHGLMTV 633
            ||..||:.|:|:|.|.|:.:|.:.:   :...|.||..|:|:||..|..||.|:|.|||...|.|
 Worm   516 KKFLCVECPIPNQCVNLRTLAGKSKDGGENKNLGSIVLKIVLQMICKTGGALWKVNIPLKNTMIV 580

  Fly   634 GFDVCHSPKNKNKSYGAFVATMDQKESFRYFSTVNEHIKGQELSEQMSVNMACALRSYQEQH-RS 697
            |:|:.|....|.|:.||.|:| ...:..:::|....|....:|...::..:..||:.|.:.: ::
 Worm   581 GYDLYHDSTLKGKTVGACVST-TSNDFTQFYSQTRPHENPTQLGNNLTHFVRKALKQYYDSNDQT 644

  Fly   698 LPERILFFRDGVGDGQLYQVVNSEVNTLKDRLDEIYKSAGK-----QEGCRMTFIIVSKRINSRY 757
            ||.|::.:|||.||||:..:.|:||..::|..|.:...|.:     ||..::.||||:||:|.|.
 Worm   645 LPSRLILYRDGAGDGQIPYIKNTEVKLVRDACDAVTDKAAELSNKVQEKIKLAFIIVTKRVNMRI 709

  Fly   758 ------FTGHRNPVPGTVVDDVITLPERYDFFLVSQAVRIGTVSPTSYNVISDNMGLNADKLQML 816
                  .....||.||||||..:|.|||.||:||.|.|..|||:|.|||:|.|:..|..||.|.|
 Worm   710 LKQGSSLDNAINPQPGTVVDTTVTRPERMDFYLVPQFVNQGTVTPVSYNIIHDDTDLGPDKHQQL 774

  Fly   817 SYKMTHMYYNYSGTIRVPAVCHYAHKLAFLVAESINRAPSAGLQNQLYFL 866
            ::|:.|:|||:.||:||||.|.||||||||.|:|::...:..|:::|:||
 Worm   775 AFKLCHLYYNWQGTVRVPAPCQYAHKLAFLTAQSLHDDANGCLRDKLFFL 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aubNP_476734.1 ArgoN 105..219 CDD:293095 26/120 (22%)
PAZ_piwi_like 272..392 CDD:239211 36/123 (29%)
Piwi_piwi-like_Euk 400..849 CDD:240016 162/474 (34%)
prg-1NP_492121.1 ArgoN 44..>106 CDD:293095 16/61 (26%)
PAZ 218..354 CDD:198017 43/136 (32%)
Piwi_piwi-like_Euk 341..807 CDD:240016 162/474 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159340
Domainoid 1 1.000 98 1.000 Domainoid score I4495
eggNOG 1 0.900 - - E1_KOG1042
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37963
Inparanoid 1 1.050 411 1.000 Inparanoid score I1044
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54391
OrthoDB 1 1.010 - - D220258at2759
OrthoFinder 1 1.000 - - FOG0003636
OrthoInspector 1 1.000 - - otm14694
orthoMCL 1 0.900 - - OOG6_100694
Panther 1 1.100 - - LDO PTHR22891
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3665
SonicParanoid 1 1.000 - - X548
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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