DRSC/TRiP Functional Genomics Resources

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Protein Alignment aub and wago-1

DIOPT Version :10

Sequence 1:NP_476734.1 Gene:aub / 34524 FlyBaseID:FBgn0000146 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_492045.1 Gene:wago-1 / 172463 WormBaseID:WBGene00011061 Length:945 Species:Caenorhabditis elegans


Alignment Length:956 Identity:176/956 - (18%)
Similarity:350/956 - (36%) Gaps:232/956 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 AVQMHKSEGDPRGSVRGRRLITD---LVYSRPPGMTSKKGVVGTHITVQANYFKVLKRPNWTIYQ 130
            |.::|:|.|:.....|.::|..:   .:|.:|    ::.|.:|..:.:|.|.|.:......|:::
 Worm    35 AQKLHQSTGNDACIKRLQQLNVEDGAKMYMKP----TEPGKMGRPVDIQTNVFGIEVTKETTVHR 95

  Fly   131 YRV----DFTPDVEATRLRRS-----------------FLYEHKG-----ILGG--YIFDG---- 163
            :.|    |.|...|.|..::.                 ||...|.     :..|  .::||    
 Worm    96 FMVHAKADLTSTKEVTFTKKGKEDFVVQDRRDKCCNIFFLAVEKNPEFFKMKDGNQIVYDGQSTL 160

  Fly   164 ---TNMF-----------------------------CIN-QFKAVQDSPYVL--ELVTKSRAGEN 193
               .|:|                             ||: :..|.:|:...|  |.:.|..|.:|
 Worm   161 YTTVNLFSELDANGTKSKVFQINGADTGNDDLKTLPCISLEIYAPRDNSITLSSENLGKRTADQN 225

  Fly   194 IEIKIKAVGSVQSTDAEQFQVLNLILRRAMEGLDLKLVSRYYYDPQAKINL-----ENFRM---- 249
            ||:          .:.|..|.|.|.|.:..    ::..:|:......|:..     |.|..    
 Worm   226 IEV----------NNREYTQFLELALNQHC----VRETNRFGCFEHGKVYFLNATEEGFDQRDCV 276

  Fly   250 ------QLWPGYQTSI--------RQHENDILLCSEICHKVMRTETLYNILSDAI-RDSDDYQST 299
                  ||:||.:.:|        |...|..|:...:.....:.:|:...|.|.. :|..:..:.
 Worm   277 DVGDGKQLYPGLKKTIQFIEGPYGRGQNNPSLVIDGMKAAFHKEQTVIQKLFDITGQDPSNGLNN 341

  Fly   300 FKR-----AVMGMVILTDYNNKT--YRIDDVDFQSTPLCKFKTNDGE-ISYVDYYKKRYNIIIRD 356
            ..|     .:.|:...:.|.|:.  .||:.:..:|....:|:..||: .|..:||..:|.|.::.
 Worm   342 MTREKAAAVIKGLDCYSTYTNRKRHLRIEGIFHESATKTRFELPDGKTCSIAEYYADKYKISLQY 406

  Fly   357 LKQPLVMSRPTDKNIRGGNDQAIMIIPELARATGMTDAMRADFRTLRAMSEHTRLNPDRRIERLR 421
            ....||:.:.     ||.|:.....:..::|...:|...:...::.:...|...| ||.| :|:.
 Worm   407 PNANLVVCKD-----RGNNNYFPAELMTVSRNQRVTIPQQTGNQSQKTTKECAVL-PDVR-QRMI 464

  Fly   422 MFNKRLKSCKQSVETLKSWNIELDSALVEIPARVLPPEKILFGNQKIFVCDARADWTNEFRTCSM 486
            :..|...:.....|.|.:..|::.|..:.:.||.|..:::::  |:..:.|              
 Worm   465 ITGKNAVNITLENELLVALGIKVYSEPLMVQARELDGKELVY--QRSVMSD-------------- 513

  Fly   487 FKNVHINRW-----YVITPSR-----------------NLRETQEFVQMCIRTASSMKMNICNPI 529
                 :.:|     :.:.|:.                 ::.:..:.|.|.|.:.....|.|..|.
 Worm   514 -----MGKWRAPPGWFVKPATVPDLWAAYAVGNPGCRFSIGDVNQLVGMFIDSCKKKGMVIKPPC 573

  Fly   530 YEEIPDDRNGTYS-----QAIDNAAANDPQIVMVVMRSP---NEEKYSCIKKRTCVDRPVPSQVV 586
                   ..|.||     ..::..||:..:.|:::....   ..::|..:::||.:      .|.
 Worm   574 -------ETGLYSTEKIMTQLEKVAASKCKYVLMITDDAIVHLHKQYKALEQRTMM------IVQ 625

  Fly   587 TLKVIAPRQQKPTGLMSIATKVVIQMNAKLMGAPWQVVIPLHGL----MTVGFDVCHSP------ 641
            .:|:.........|.......::.:.|.||.|..:.|......:    :.:|..|...|      
 Worm   626 DMKISKANAVVKDGKRLTLENIINKTNVKLGGLNYTVSDAKKSMTDEQLIIGVGVSAPPAGTKYM 690

  Fly   642 -KNK---NKSYGAFVATMDQKESFRYFSTVNEHI---KGQELSEQMSVNMACALRSYQEQHRSLP 699
             .||   |.....|.:.......|     |.:.:   .||:....:...:..::..:::..::||
 Worm   691 MDNKGHLNPQIIGFASNAVANHEF-----VGDFVLAPSGQDTMASIEDVLQNSIDLFEKNRKALP 750

  Fly   700 ERILFFRDGVGDGQLYQVVNSEVNTLKDRLDEIYKSAGKQEGCRMTFIIVSKRINSRYF-----T 759
            :||:.:|.|..:|....::..|:...:..:.      |..:..::.||:|:|..:.|:|     :
 Worm   751 KRIIIYRSGASEGSHASILAYEIPLARAIIH------GYSKEIKLIFIVVTKEHSYRFFRDQLRS 809

  Fly   760 GHR----NPVPGTVVDDVITLPERYDFFLVSQAVRIGTVSPTSYNVISDNMGLNADKLQMLSYKM 820
            |.:    |..||.|:|:.:|.|....|||.......||.....|.|::|:.....|:|:.|::.:
 Worm   810 GGKATEMNIPPGIVLDNAVTNPACKQFFLNGHTTLQGTAKTPLYTVLADDCKAPMDRLEELTFTL 874

  Fly   821 THMYYNYSGTIRVPAVCHYAHKLA----FLVAESINRAPSAGLQNQ 862
            .|.:...|.:..:|...:.|::.|    .|..|...:.|....::|
 Worm   875 CHHHQIVSLSTSIPTPLYVANEYAKRGRDLWGELTTKGPIEAKESQ 920

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aubNP_476734.1 PAZ_piwi_like 272..392 CDD:239211 25/128 (20%)
Piwi_piwi-like_Euk 400..849 CDD:240016 92/508 (18%)
wago-1NP_492045.1 PAZ_argonaute_like 320..430 CDD:239212 24/114 (21%)
Piwi 598..905 CDD:214930 62/323 (19%)

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