DRSC/TRiP Functional Genomics Resources

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Protein Alignment aub and sago-2

DIOPT Version :10

Sequence 1:NP_476734.1 Gene:aub / 34524 FlyBaseID:FBgn0000146 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_490758.1 Gene:sago-2 / 171653 WormBaseID:WBGene00018921 Length:887 Species:Caenorhabditis elegans


Alignment Length:920 Identity:186/920 - (20%)
Similarity:326/920 - (35%) Gaps:272/920 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 GTHITVQANYFKVLKRPNWTIYQYRVDFT-----PD-VEAT------------------------ 142
            ||.:.:..|..|:..:||..||:|.|...     || .|||                        
 Worm    38 GTKVNIDTNIRKLTIKPNQPIYKYAVQVNYVFRKPDGTEATIEMSKSAKKGTEHDNDKTRCQNVY 102

  Fly   143 --RLRR--------SFLYEHKGIL--------GGYIFDGTNMFCINQ-FKAVQDSPYVLELVTKS 188
              .::|        .|.|:.:..|        ....|..|:..|..| ||..|   :||:.|.:|
 Worm   103 NEAIKRYDELKTGGPFFYDRQASLYTLTKLKNESISFVVTDKICKRQNFKEAQ---FVLKKVDQS 164

  Fly   189 RAGENIEIKIKAVGSV-QSTDAEQFQVLNLILR-RAMEGLDLKLVS---RYYYDPQAKINL---E 245
            ....:.:: ||...|. .:.|....:.:|:|:. .|.|..::..|.   .|..||.. :::   |
 Worm   165 FQSTSNDV-IKTTNSCPANADKTLLEAMNIIVSGPAFENKNVITVGACVHYLIDPTG-VDVAYKE 227

  Fly   246 NFRMQLWP--GYQTSIRQHEN------DILLCSEICHKVMRTETL----YNILSDAIRDSDDYQS 298
            ....||:.  |...|::..|.      .:.:.:|     |:| ||    |..|.:.::....:.:
 Worm   228 YPEGQLYSGVGVSKSVKTLEGTDKKVPSLFMTTE-----MKT-TLFHPDYAPLVELLQTFRGFST 286

  Fly   299 TFK----------RAVMGMVILTDYN-NKTYRIDDVDFQSTPLCKFKTNDGEISY---------- 342
            |.|          :|.:|:.::.:|. :|....|.|..:   :.:|.|:..|..:          
 Worm   287 TLKANSPAAQRIEKAFVGLDVVLNYGVHKGLGEDGVVMK---IRRFHTSAKETCFEVEKSTREFT 348

  Fly   343 --VDYYKKRYNIIIRDLKQPLVMSRPTDKNIRGG---NDQAIMIIPELARATGMTDAM----RAD 398
              .||:||:|.|   .||.|.:.:... |..:|.   ..:.:::.|   ..|...|.|    :||
 Worm   349 NVFDYFKKKYGI---TLKYPDLFTIEA-KGKQGKIHFPAEVLLLCP---NQTVTNDQMINNEQAD 406

  Fly   399 FRTLRAMSEHTRLNPDRRIERLRMFNKRLKSCKQSVETLKSWNIELDS------ALVEIPAR--- 454
            ...:.|...|.|                    |.:.:|:.. |:.|.|      ..||.|..   
 Worm   407 MIKMSAAQPHIR--------------------KTTTDTIVR-NVGLASNNIYGFIKVEDPVNLEG 450

  Fly   455 -VLPPEKILF-GNQKIFVCDARADWTNEFRTCSMFKNV-HINRWYVITPSRNLRETQEFVQMCIR 516
             |||..||.| ||:...:.:.::.:..:|.....:.:. .:.:|.::     ..:.:|...:..:
 Worm   451 MVLPKPKIAFAGNRLADLANPKSRFPTDFNRAGQYYDAKELTKWELV-----FVQNEEVQGLAKQ 510

  Fly   517 TASSM---KMNICNPIYEEIPDDRNGTYSQAIDNAAANDPQIVMVVMRS---------PNEEKYS 569
            .|..|   .|...||....|   ..|........|.|...|::..|::|         ..|:|| 
 Worm   511 LADEMVNNGMKCSNPTMSFI---IRGDLEPIFKKAKAAGTQLLFFVVKSRYNYHQQIKALEQKY- 571

  Fly   570 CIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVIQMNAKLMG-----------APWQV 623
                          .|:|.::.|...:|..........::.:.|.||.|           .|.::
 Worm   572 --------------DVLTQEIRAETAEKVFRQPQTRLNIINKTNMKLGGLNYAIGSEAFNKPNRL 622

  Fly   624 VIPLHGLMT-------------VGFDVCHSPKNKNKSYGAFVATMDQKESFRYFSTVNEHIKGQE 675
            ::   |.:|             ||| ..:..|:..|..|.:|.....::.|.  |.:.:.:    
 Worm   623 IV---GFVTSQRVGGNPDYPISVGF-AANMLKHHQKFAGGYVYVHRDRDVFG--SIIKDTL---- 677

  Fly   676 LSEQMSVNMACALRSYQEQHRSLPERILFFRDGVGDGQLYQVVNSEVNTLKDRLDEIYKSAGKQE 740
                :::...|.      :.|..|:.||.:.:||.:|| :.::|.|.            ||..:|
 Worm   678 ----LTIFKTCT------EQRGRPDDILLYFNGVSEGQ-FSMINEEF------------SARVKE 719

  Fly   741 GC-------------RMTFIIVSKRINSRYFTGHR----NPVPGTVVDDVITLPERYDFFLVSQA 788
            .|             .:|.|..||..|.|.:...:    |..||||||..|......:::..|..
 Worm   720 ACMAFQKEGTPPFRPHITIIASSKAHNERLYKSDKGRIVNLEPGTVVDHTIVSNVYTEWYHASAV 784

  Fly   789 VRIGTVSPTSYNVI-SDNMGLNADKLQMLSYKMTHMYYNYS---GTIRVPAVCH----YAHKLAF 845
            .|.||...|.:.:| :...|..|:.|..|......:.|::.   ..:.:|...:    |:.:.|.
 Worm   785 ARQGTAKATKFTLIFTTKAGPQAEPLWHLEQLTNDLCYDHQIVFHPVGLPVPLYIADRYSQRGAM 849

  Fly   846 LVAESINRAP 855
            ::|  .|:.|
 Worm   850 VLA--ANQGP 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aubNP_476734.1 PAZ_piwi_like 272..392 CDD:239211 30/149 (20%)
Piwi_piwi-like_Euk 400..849 CDD:240016 100/521 (19%)
sago-2NP_490758.1 PAZ_argonaute_like 272..389 CDD:239212 23/123 (19%)
Piwi-like 444..849 CDD:239208 89/460 (19%)

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