DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment aub and piwil1

DIOPT Version :10

Sequence 1:NP_476734.1 Gene:aub / 34524 FlyBaseID:FBgn0000146 Length:866 Species:Drosophila melanogaster
Sequence 2:XP_002940227.2 Gene:piwil1 / 100488735 XenbaseID:XB-GENE-963233 Length:861 Species:Xenopus tropicalis


Alignment Length:896 Identity:318/896 - (35%)
Similarity:495/896 - (55%) Gaps:82/896 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ARGRGRGRKPNNVEANRGFAPSLGQKSDPSHSEGNQASG-------GNG--------------GG 53
            ||||.||::|          |:.|::..|.:::......       |.|              ..
 Frog     9 ARGRARGQEP----------PAPGKEPQPGYTQKTSTEEQAEPEIVGRGRQKRASVAHSTPVTQA 63

  Fly    54 GDAQVGPSIEKSSLSAVQMHKSEGDPRGSVRGRRLITDLVYSRPPGM----TSKKGVVGTHITVQ 114
            ||.|:....::.||         ||..|.   ||...||..:....:    .||.|..|:.|.:.
 Frog    64 GDLQISAGFQEISL---------GDRGGR---RRDFHDLGINTRQAIEHVKESKTGSSGSIIQLS 116

  Fly   115 ANYFKVLKRPNWTIYQYRVDFTPDVEATRLRRSFLYEHKGILG-GYIFDGTNMFCINQFKAVQDS 178
            .|:.|::.||.|.::||.:|:.|.:|:..||.:.|::|:.::| ...||||.:|...:...|.  
 Frog   117 TNHIKLISRPQWVLFQYHIDYAPQMESRGLRCALLFQHEELIGKARAFDGTMLFLPKRLDKVN-- 179

  Fly   179 PYVLELVTKSRAGENIEIKIKAVGSVQSTDAEQFQVLNLILRRAMEGLDLKLVSRYYYDPQAKIN 243
                |:.:::|.||.::|.|.....:..|....||..|:|.||.::.:::|.:.|.||:|..:|.
 Frog   180 ----EVFSQTRNGETVKITITLTNELPPTSPTCFQFYNIIFRRLLKMMNMKQIGRNYYNPNDQIE 240

  Fly   244 LENFRMQLWPGYQTSIRQHENDILLCSEICHKVMRTET----LYNILSDAIRDSDDYQSTFKRAV 304
            :.:..:.::||:.|||.|:||:|:|..::.|||:|:||    :||:....  :|..:.....:.:
 Frog   241 ISSHGLTIYPGFSTSILQYENNIMLSIDVSHKVLRSETVLDYMYNVNQKV--ESHKFHDICSKDL 303

  Fly   305 MGMVILTDYNNKTYRIDDVDFQSTPLCKFKTNDG-EISYVDYYKKRYNIIIRDLKQPLVMSRPT- 367
            :|.::||.||||||||||:::..||...||.:|| |||:||||:.:||..|.||.||.::..|. 
 Frog   304 IGQIVLTKYNNKTYRIDDINWDFTPESTFKKSDGSEISFVDYYRTQYNKGITDLNQPALVHNPKK 368

  Fly   368 ---DKNIRGGNDQAIMIIPELARATGMTDAMRADFRTLRAMSEHTRLNPDRRIERLRMFNKRLKS 429
               .:|:..|   .|::|||....||:||.||:||..::.::.||||.|::|..::..|.|.:..
 Frog   369 PRGPQNVPAG---PILLIPEFCFLTGLTDRMRSDFNVMKDLAIHTRLAPEQREIQVGKFLKNIHK 430

  Fly   430 CKQSVETLKSWNIELDSALVEIPARVLPPEKILFGNQKIFVCDARADWTNEFRTCSMFKNVHINR 494
            .....:.|:.|.:..||.|:....||.|.||||...:........|||:.|.|..::.:..|::.
 Frog   431 DDSVQKELQDWGLNFDSKLLPFAGRVAPAEKILQAGKTADYNPQFADWSRELRGPTLIRVKHLDN 495

  Fly   495 WYVITPSRNLRETQEFVQMCIRTASSMKMNICNPIYEEIPDDRNGTYSQAIDNAAANDPQIVMVV 559
            |.::...||........|...:.:..|.:.:...:..|: ||....|.:.:......|.|:|:.:
 Frog   496 WVLLYTRRNYDAANTLTQNLFKVSGQMGIKMNRAVMVEV-DDTTDAYVKVLQQKVTPDVQMVVCL 559

  Fly   560 MRSPNEEKYSCIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVIQMNAKLMGAPWQVV 624
            :.|..::||..|||..|:|.|||||.|..|.:    .||..::|:|||:.:|||.|:.|..|.|.
 Frog   560 LSSNRKDKYDAIKKYLCIDCPVPSQCVLAKTL----NKPQTVVSVATKIALQMNCKMGGELWTVE 620

  Fly   625 IPLHGLMTVGFDVCHSPKNKNKSYGAFVATMDQKESFRYFSTVNEHIKGQELSEQMSVNMACALR 689
            |||..||.||.|..|...:..:|.|||||:::...: |:||......:.||:.:.:.|.|..||:
 Frog   621 IPLKELMIVGIDCYHDTLSGKRSIGAFVASLNPSMT-RWFSRCVLQAQKQEIVDGLKVCMHAALK 684

  Fly   690 SYQEQHRSLPERILFFRDGVGDGQLYQVVNSEVNTLKDRLDEIYKSAGKQEGCRMTFIIVSKRIN 754
            ::...::|||.||:.:|||||||||..:|..|:..|:|.:    :||.|....::|.|:|.||::
 Frog   685 AWFNCNKSLPSRIIIYRDGVGDGQLKTMVEYEIPQLQDCI----RSAEKDYSPKLTVIVVKKRVS 745

  Fly   755 SRYF--TGHR--NPVPGTVVDDVITLPERYDFFLVSQAVRIGTVSPTSYNVISDNMGLNADKLQM 815
            :|:|  .|.|  ||.|||:||..||.||.||||::||:||:|:||||.|||:.|:..|..|.:|.
 Frog   746 ARFFAHVGGRLQNPPPGTIVDVEITRPEWYDFFIISQSVRVGSVSPTHYNVVYDSGALKPDHMQR 810

  Fly   816 LSYKMTHMYYNYSGTIRVPAVCHYAHKLAFLVAESINRAPSAGLQNQLYFL 866
            |:||:.|:|||:.|.|||||.|.|||||||||.:||:|.|...|.::||:|
 Frog   811 LTYKLCHLYYNWPGVIRVPAPCQYAHKLAFLVGQSIHREPHLTLSDRLYYL 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aubNP_476734.1 PAZ_piwi_like 272..392 CDD:239211 51/128 (40%)
Piwi_piwi-like_Euk 400..849 CDD:240016 174/452 (38%)
piwil1XP_002940227.2 GAGE 16..107 CDD:461753 20/112 (18%)
PAZ_piwi_like 276..393 CDD:239211 47/121 (39%)
Piwi_piwi-like_Euk 401..844 CDD:240016 174/452 (38%)

Return to query results.
Submit another query.