DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment piwi and AGO3

DIOPT Version :9

Sequence 1:NP_001285825.1 Gene:piwi / 34521 FlyBaseID:FBgn0004872 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_174414.1 Gene:AGO3 / 840017 AraportID:AT1G31290 Length:1194 Species:Arabidopsis thaliana


Alignment Length:963 Identity:209/963 - (21%)
Similarity:369/963 - (38%) Gaps:256/963 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GRGRRRPLNEDDSSTSRGSGDGPRVKVFRGSSSGDPRADPRIEASRERRALEEAPRREGGPTERK 70
            |...|:|....||:....|....  .|...::||.....|:..:|.::.           |.:|.
plant   286 GAWARKPQLFSDSTVLPSSSSSN--VVASHTASGSQVMTPKPSSSDKKE-----------PVKRP 337

  Fly    71 PWGDQYDYLNTRPAELVSKKGTDGVPVMLQTNFFRLKTKPEWRIVHYHVEFEPSIENPRVRMGVL 135
            ..|..           :..||.    :.|..|.||:....|..|.||.|:.:....:.::....|
plant   338 DKGGN-----------IKVKGV----INLSVNHFRVSFSTESVIRHYDVDIKGENSSKKISRFEL 387

  Fly   136 -----------SNHANLL----GSGYLFDGLQLFTTR---KFEQEITVLSGKSKLDIEYKISIKF 182
                       ::..|.:    |...:|..::|.|..   .|.:...::.|:|     |...||.
plant   388 AMVKEKLFKDNNDFPNAMTAYDGQKNIFSAVELPTGSFKVDFSETEEIMRGRS-----YTFIIKQ 447

  Fly   183 VGFISCAEPRFLQVLNL----------ILRRSMKGLNLEL----------VGRNLFDPRAKIEI- 226
            |        :.|::|:|          |.|..::|:::.:          ||:..|..|.:|:. 
plant   448 V--------KELKLLDLQAYIDGRSTFIPRDVLQGMDVVMKEHPSKRMITVGKRFFSTRLEIDFG 504

  Fly   227 ------REFKMELWPGYE-------TSIRQHEKDILLGTEITHKVMRTETIYDIMRRCSHNPARH 278
                  :.|...|.|..:       :|:....|.|        .|:....:|...|.........
plant   505 YGVGAAKGFHHTLKPTVQGLSLCLNSSLLAFRKAI--------SVIEYLKLYFGWRNIRQFKNCR 561

  Fly   279 QDEVRVNVLDLIVLTDYNNRTYRI----------NDVDF------GQTPKSTFSCKGRDISFVEY 327
            .|:|...::.|.|..|:.....:.          .|:.|      |..|.       |.||.|||
plant   562 PDDVVQELIGLKVTVDHRKTKQKFIIMGLSKDDTKDIKFDFIDHAGNQPP-------RKISIVEY 619

  Fly   328 YLTKYNIRIRDHNQPLLISKNRDKALKTNASELVVLIP-ELCRVTGLNAEMRSNFQLMRAMSSYT 391
            :..||...|...:.|.|   |..|..:.|      .:| |.|.:  :..::....:|.|..:::.
plant   620 FKEKYGRDIDHKDIPCL---NLGKKGREN------FVPMEFCNL--VEGQIFPKEKLYRDSAAWL 673

  Fly   392 R----MNPKQRTDRLRAFNHRLQNT--PESVKVLRDWNMELDKNVTEVQGRII--------GQQN 442
            :    :.|:||.:.:   |..::::  |....::.::.:.:|.|:|.|:||::        .::.
plant   674 KELSLVTPQQRLENI---NKMIKSSDGPRGGDIIGNFGLRVDPNMTTVEGRVLEAPTLKLTDRRG 735

  Fly   443 IVFHNGKVPAGENADWQRHFRDQRMLTTP--SDG--LDRWAVIAPQRNSHELRT-----LLDSLY 498
            ...|...:  .|:..|.        |||.  :.|  :..|||: ....|..|:.     .::.|.
plant   736 NPIHEKLM--SESNQWN--------LTTKGVTKGSIIKHWAVL-DFTASESLKKKMPGYFVNKLI 789

  Fly   499 RAASGMGLRIRSP------QEFIIYDDRTGTYVRAMDDCVRS------------DPKLILCLVPN 545
            ....|:|:::.:|      ....:||.      .|:::.:||            .|.|:||.:..
plant   790 ERCKGLGMQMEAPIVCKTSSMETLYDG------NALEELLRSVIDEASHNHGGACPTLVLCAMTG 848

  Fly   546 DNAERYSSIK-----KRGYVDRAVPT-QVVTLKTTKNRSLMSIATKIAIQLNCKLGYTPWMIEL- 603
            .: :.|.::|     |.|.|.:...| ..:..:|..::.|.::|.||    |.|:|.|  .:|| 
plant   849 KH-DGYKTLKWIAETKLGLVTQCFLTISAIKGETVSDQYLANLALKI----NAKVGGT--NVELV 906

  Fly   604 --------PLSGLMTIGFDI--AKSTRDRKRAYGALIASMDLQQNSTYFSTV-------TECSAF 651
                    ....:|.||.|:  ..:..:...:..|::.:::..:.:.|.:.|       .|...|
plant   907 DNIFSFFKKEDKVMFIGADVNHPAAHDNMSPSIVAVVGTLNWPEANRYAARVKAQSHRKEEIQGF 971

  Fly   652 DVLANTLWPMIAKALRQYQHEHRKLPSRIVFYRDGVSSGSLKQLFEFEVKDIIEKLKTEYARVQL 716
               ..|.|.:|    ..:.....|.|::||.:|||||.|....:...|::::    |..:|:|..
plant   972 ---GETCWELI----EAHSQAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNV----KDVFAKVGY 1025

  Fly   717 SPPQLAYIVVTRSMNTRFF-----LNGQ---NPPPGTIVDDVITLPERYDFYLVSQQVRQGTVSP 773
            : ||:..||..:...||||     .:|:   |.|.||:||..|..|..|||||.||....||..|
plant  1026 N-PQITVIVAQKRHQTRFFPATTSKDGRAKGNVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKP 1089

  Fly   774 TSYNVLYSSMGLSPEKMQKLTYKMCHLYYNWSGTTR----VPAVCQYAKKLAT 822
            |.|.||...:|.:..::|||.:.:|   :.::..|:    ||.| .||.|.|:
plant  1090 THYYVLSDEIGFNSNQIQKLIFDLC---FTFTRCTKPVALVPPV-SYADKAAS 1138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
piwiNP_001285825.1 ArgoN 91..201 CDD:293095 26/137 (19%)
PAZ 262..396 CDD:198017 30/154 (19%)
Piwi_piwi-like_Euk 382..826 CDD:240016 125/518 (24%)
AGO3NP_174414.1 PLN03202 318..1138 CDD:215631 199/927 (21%)
ArgoN 336..479 CDD:293095 32/170 (19%)
PAZ 560..663 CDD:280352 26/120 (22%)
Piwi_ago-like 703..1144 CDD:240015 118/476 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54391
OrthoDB 1 1.010 - - D220258at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.890

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