DRSC/TRiP Functional Genomics Resources

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Protein Alignment piwi and Piwil2

DIOPT Version :10

Sequence 1:NP_476875.1 Gene:piwi / 34521 FlyBaseID:FBgn0004872 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_006252333.2 Gene:Piwil2 / 306011 RGDID:1306964 Length:1005 Species:Rattus norvegicus


Alignment Length:861 Identity:277/861 - (32%)
Similarity:452/861 - (52%) Gaps:55/861 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GRGRR----RPLNEDDSSTSRGSGDGPRVKVFRGSSSGDPRADPRIEASRERRALEEAPRREGGP 66
            |||..    .||.....|..||....|  ..| |.::.||   ||:.   :...|.........|
  Rat   177 GRGSSDVSLLPLGRAAGSIGRGVDKPP--SAF-GLTARDP---PRLP---QPPTLSPTSLHSSDP 232

  Fly    67 -----TERKPWGDQYDYLNTRPAELVSKKGTDGVPVMLQTNFFRLKTKPEWRIVHYHVEFEPSIE 126
                 .|||            ..||:.|:|:.|.|..|..|..:::...| .:..|||.|.|::|
  Rat   233 PPVLTIERK------------EKELLVKQGSKGTPQSLGLNLIKIQCHNE-AVYQYHVTFSPNVE 284

  Fly   127 NPRVRMGVLSNHANLLGSGYLFDGLQLFTTRKFEQEITVLSGKSKLDIEYKISIKFVGFISCAEP 191
            ...:|.|:|.:|.::.|:...|||..|:...|.:|.:.:.|.:...|.|..|.|:....:.....
  Rat   285 CKSMRFGMLKDHQSVTGNVTAFDGSILYLPVKLQQLVELKSQRKTDDAEISIKIQLTKILEPCSD 349

  Fly   192 RFLQVLNLILRRSMKGLNLELVGRNLFDPRAKIEIREFKMELWPGYETSIRQHEKDILLGTEITH 256
            ..:...|::.||.||.|:::|||||.:||.:.:.:::.::::||||..|||:.:..:.|..:::|
  Rat   350 LCIPFYNVVFRRVMKLLDMKLVGRNFYDPTSAMVLQQHRLQIWPGYAASIRRTDGGLFLLADVSH 414

  Fly   257 KVMRTETIYDIMRRC-SHNPARHQDEVRVNVLDLIVLTDYNNRTYRINDVDFGQTPKSTF-SCKG 319
            ||:|.:::.|:|... ..|....|||....::..||:|.||||||||:|||:.:|||.:| ...|
  Rat   415 KVIRNDSVLDVMHAIYQQNKEHFQDECSKLLVGSIVITRYNNRTYRIDDVDWNKTPKDSFVMSDG 479

  Fly   320 RDISFVEYYLTKYNIRIRDHNQPLLISKNRDKALKTNASEL----VVLIPELCRVTGLNAEMRSN 380
            ::|:|:|||...|.|.:::.:|||||  :|....:.|...|    ::|:|||..:||:..:|:.:
  Rat   480 KEITFLEYYSKNYGITVKEDDQPLLI--HRPSERQNNHGTLLKGEILLLPELSFMTGIPEKMKKD 542

  Fly   381 FQLMRAMSSYTRMNPKQRTDRLRAFNHRLQNTPESVKVLRDWNMELDKNVTEVQGRIIGQQNIVF 445
            |:.|:.::....::|||....|.....|:.....:...|..|.:.|.|:|.:::||::..:.|..
  Rat   543 FRAMKDLTQQINLSPKQHHSALECLLQRISQNETANNELTRWGLSLQKDVHKIEGRLLPMERINL 607

  Fly   446 HNGKVPAGENADWQRHF-RDQRMLTTPSDGLDRWAVIAPQRNSHELRTLLDSLYRAASGMGLRIR 509
            .|......|:.:|.:.. ||..:||.|   :..||:..|:|...:.|.|::.|.:.|..:|:||.
  Rat   608 RNTSFVTSEDLNWVKEVTRDASILTIP---MHFWALFYPKRAMDQARELVNMLEKIAGPIGMRIS 669

  Fly   510 SPQEFIIYDDRTGTYVRAMDDCVRSDPK--LILCLVPNDNAERYSSIKKRGYVDRAVPTQVVTLK 572
            .|....:.|||..||:|.:...:..:.|  :::|::.....:.|.:|||...|...||:||:.::
  Rat   670 PPAWVELKDDRIETYIRTIQSLLGVEGKIQMVVCIIMGTRDDLYGAIKKLCCVQSPVPSQVINVR 734

  Fly   573 TT-KNRSLMSIATKIAIQLNCKLGYTPWMIELPLSGLMTIGFDIAKSTRDRKRAYGALIASMDLQ 636
            |. :...|.|:|.||.:|:|||||...|.:::||..||.||.|:........|:....:||::|.
  Rat   735 TIGQPTRLRSVAQKILLQMNCKLGGELWGVDIPLKQLMVIGMDVYHDPSRGMRSVVGFVASINLT 799

  Fly   637 QNSTYFSTVTECSAFDVLANTLWPMIAKALRQYQHEHRKLPSRIVFYRDGVSSGSLKQLFEFEVK 701
            ....|...|.:....::: ::|...:..:|::|...:..||.:||.||||||.|.||.:..:|  
  Rat   800 LTKWYSRVVFQMPHQEIV-DSLKLCLVGSLKKYYEVNHCLPEKIVVYRDGVSDGQLKTVANYE-- 861

  Fly   702 DIIEKLKTEYARVQLSPPQLAYIVVTRSMNTRFFLNGQN----PPPGTIVDDVITLPERYDFYLV 762
              |.:|:..:.......|::...||.:.::|..:|...:    |.|||:||..||..|..||||:
  Rat   862 --IPQLQKCFEAFDNYHPKMVVFVVQKKISTNLYLAAPDHFVTPSPGTVVDHTITSCEWVDFYLL 924

  Fly   763 SQQVRQGTVSPTSYNVLYSSMGLSPEKMQKLTYKMCHLYYNWSGTTRVPAVCQYAKKLATLVGTN 827
            :..||||...||.|..:.::..|||:.||:||:|:||:|:||.||.||||.|:||.|||.|.|..
  Rat   925 AHHVRQGCGIPTHYICVLNTANLSPDHMQRLTFKLCHMYWNWPGTIRVPAPCKYAHKLAFLSGQI 989

  Fly   828 LHSIPQNALEKKFYYL 843
            ||..|...|.:..::|
  Rat   990 LHHEPAIQLCENLFFL 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
piwiNP_476875.1 PAZ 262..396 CDD:198017 49/139 (35%)
Piwi_piwi-like_Euk 382..826 CDD:240016 147/451 (33%)
Piwil2XP_006252333.2 ArgoL1 371..418 CDD:462567 17/46 (37%)
PAZ_piwi_like 419..536 CDD:239211 46/118 (39%)
Piwi_piwi-like_Euk 544..988 CDD:240016 147/451 (33%)

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