DRSC/TRiP Functional Genomics Resources

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Protein Alignment piwi and csr-1

DIOPT Version :9

Sequence 1:NP_001285825.1 Gene:piwi / 34521 FlyBaseID:FBgn0004872 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001040938.1 Gene:csr-1 / 177591 WormBaseID:WBGene00017641 Length:1030 Species:Caenorhabditis elegans


Alignment Length:1029 Identity:196/1029 - (19%)
Similarity:353/1029 - (34%) Gaps:329/1029 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GRG---RRRPLNEDDSST--------SRGSGDGPRVKVFRGSSSG------------DPR----- 42
            |||   |||   :|:.|.        :||:..|.    :||.:.|            ||:     
 Worm    91 GRGGYDRRR---DDEESKAENRFGGYNRGANGGN----YRGRTGGSGRGGSTQTTTVDPKYNGLI 148

  Fly    43 ----ADPRIEASRERRALEEAPR------------------------------------------ 61
                |:|:::........::.||                                          
 Worm   149 LENSAEPKLKGLNSDMNQKQNPRLALNIFGLELSERTIFRHVVQMKLIDRQHNKEYILTTMSARG 213

  Fly    62 REGGPTERKPWGDQYDYLNTRPAELVSKKGTDGVPVMLQTNFFRLKTKPEWRIVHYHVEFEPSIE 126
            |....|::|   |.:..|:....:..:|||...:|.........|.|. |...:...::.|.::|
 Worm   214 RGNRATKQK---DNFILLDILLKQWAAKKGQQNLPAFAYDGAQSLFTL-EGISLMVDIKKEDALE 274

  Fly   127 NPRVRMGVLSNHANLLGSGYLFDGLQLFTTRKFEQEITVLSGKSKLDIEYKISIKFVGFISC--- 188
            .|.:             |.:|.|            .|:.|||  .|:|..:..::...|:..   
 Worm   275 IPEL-------------SNFLKD------------SISFLSG--DLEISCEPDLEKPSFVQTELN 312

  Fly   189 --AEPRFLQVLNLILRRS----------MKGL-----NLE------------------LVGRN-- 216
              ::|||...|:::..:|          .|||     :||                  :||.|  
 Worm   313 EWSDPRFYAYLDIVTSQSAIRSERYLSQSKGLYVHTQSLEELRVKWAVAAKGIHKGCRIVGANGP 377

  Fly   217 ----LFDPR-----AKIEIREFKMELWPGYETSIRQHEKDILLGTEITHKVMRTETIYDIMRRCS 272
                ..||:     |.|.:.:.....:|      |....:.::...:  |:.|...:  :::...
 Worm   378 LPILELDPQSTQYYASIPLSQMLQYAFP------RDFPPNRIVNPNM--KLQRAVKL--LLKDLK 432

  Fly   273 HNPARHQDEVRVNVLDLIVLTDYNNRTYRINDVDFGQTPKSTFSCKGRDISFVEYYLTKYNIRIR 337
            .||  :.|:.::          :...|..::|||:.......|..|..::.|             
 Worm   433 CNP--YYDDKQI----------WATNTITVSDVDYNAPKDPEFRQKYPNLKF------------- 472

  Fly   338 DHNQPLLISKNRDKALKTNASELVVLIP-ELCRV---TGLNAEMRSNFQLM-RAMSSYTRMNPKQ 397
                |:|      .|::........|:| |..:|   ..::..:...|:|. ||.:...|.:..|
 Worm   473 ----PML------PAVQCGTGPHKRLMPLEYLKVLPYQSIDRRVLEEFELTPRANAPNERWSTLQ 527

  Fly   398 RTDRLRAFNHRLQNTPESVKVLRDWNMEL----DKNVTEVQGRIIGQQNIVFHNGKVPAGENADW 458
            :......||.         :|::|:.:::    ..||:|:.|..:...::.:.:......|..||
 Worm   528 KHYDQFGFND---------QVMKDFGVQICNDPFNNVSEIDGERVLAPSVAYADPVHVDDEKRDW 583

  Fly   459 QRHFRDQRMLTTPSDGLDRWAVIAPQRNSHE-----LRTLLDSLYRAASGMGLRI---------- 508
            :.  :|::.:|..:.....:.::|....:.:     .:.:..:..:.....|:.|          
 Worm   584 KA--QDKKFVTPATIDHLMFVLVAGYTRTWDADCDATKFVAKAFMQRCKDKGMHIGSYSMDQHNG 646

  Fly   509 -RSPQEFII-----------YDDRTGT-YVRAMDDCVRSDPKLILCLVPNDNAERYSSIKKRGYV 560
             |..:.|:.           |.|.:.| :|..:.|.|   |.:..||   ...||.|.|      
 Worm   647 ERGSENFLTSVFKNLVTHPNYRDSSFTPFVLFISDDV---PNIHECL---KFEERMSDI------ 699

  Fly   561 DRAVPTQVVTLKTTK-------------NRSLMSIATKIAIQLNCKLGYTPWMIELPLS------ 606
                |||.|.||..|             .|:.......|.::.|.|.|...:..::|..      
 Worm   700 ----PTQHVLLKNVKKMRDNIEKKSQGGRRAYDLTLDNIVMKANIKCGGLNYTADIPRDLACWNE 760

  Fly   607 -GLMTIGFDIAKSTRDRKRAYGALIASMDLQQNSTYFSTVTECSAFDVLANTLWPMIAK-----A 665
             ....||.|:|...|:..|........:........:|.:.:....|.....:...|.:     :
 Worm   761 VSTFVIGMDVAHPDRNAAREGNPSTVGLSCNSAENPYSFIGDFLYTDPRREAIQDEILRKFTDQS 825

  Fly   666 LRQYQHEHRKLPSRIVFYRDGVSSG----SLKQLFEFEVKDIIEKLKT--------EYARVQLSP 718
            :|.:. |.|..|.:::.:|||||.|    :||     ||:.|.:.:||        :||      
 Worm   826 VRNFA-EIRGFPKKVIIFRDGVSFGEETAALK-----EVEIIEQTIKTAAKSMGHSDYA------ 878

  Fly   719 PQLAYIVVTRSMNTRFFLNGQ-------NPPPGTIV-DDVITLPERYDFYLVSQQVRQGTVSPTS 775
            |::..|||.:..:|||:..|.       ||.|.|.| .|:....:|..|....:.| |||....|
 Worm   879 PKVLAIVVKKRHHTRFYAKGGHHGNMPINPLPDTSVGGDIAEYGKRQIFIQAFRPV-QGTAKVPS 942

  Fly   776 YNVLYSSMGLSPEKMQKLTYKMCHLYYNWSGTTRVPAVCQYAKKLATLVGTNLH 829
            :.|:.....:|.|.:.|:...:|.|:...:..|.:|.....|.:||.. ||.|:
 Worm   943 FLVIRDDEEVSDEHVAKMVCAVCSLHQLVNSPTSIPTPVYVAHELAKR-GTGLY 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
piwiNP_001285825.1 ArgoN 91..201 CDD:293095 22/114 (19%)
PAZ 262..396 CDD:198017 22/138 (16%)
Piwi_piwi-like_Euk 382..826 CDD:240016 109/521 (21%)
csr-1NP_001040938.1 PAZ 399..521 CDD:198017 25/166 (15%)
Piwi-like 555..993 CDD:239208 100/469 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D220258at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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