DRSC/TRiP Functional Genomics Resources

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Protein Alignment piwi and wago-4

DIOPT Version :10

Sequence 1:NP_476875.1 Gene:piwi / 34521 FlyBaseID:FBgn0004872 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_496751.1 Gene:wago-4 / 174932 WormBaseID:WBGene00010263 Length:965 Species:Caenorhabditis elegans


Alignment Length:976 Identity:193/976 - (19%)
Similarity:346/976 - (35%) Gaps:293/976 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PTERKPWGDQY-----------DYLNTRPAELV----SKKGTDGVPVMLQTNFFRLKTKPEWRIV 115
            |...:|...:|           :.||..||..:    ::.|..||...:|||.|.::...:....
 Worm    27 PVPTQPLRSEYQTSNDACIKRLEELNIAPAAKLYPTPTEPGKCGVEAEIQTNVFGIEMHQDSLFY 91

  Fly   116 HYHVEFEPSIENPR-----------------------VRMGVLSNHANLL----------GSGYL 147
            .|.|.....::|.:                       :....|.::....          |...|
 Worm    92 QYSVNITTELKNGKEVTFTKKGKDDFVVTERHDKCCAILFRALGDYEEFFKTSDSCLIYDGQSIL 156

  Fly   148 FDGLQLF-------TTRKFEQEITVLSG--------KSKLDIEYKI------SIKF--------- 182
            |..:.||       ...|:.|    |.|        ||...|:.::      ::||         
 Worm   157 FSNVDLFQGFREGAVKTKYMQ----LDGGEMDHKDLKSLPCIKLEVFPTKNPAVKFTREAVARRA 217

  Fly   183 ----VGFISCAEPRFLQVLNLILRRSMKGLNLELV----GRNLF-DPRAK-------IEIREFKM 231
                :..:|.|   :.|:|.|.|.:.........|    |:..| ||..:       :::.:.| 
 Worm   218 TDSNLDSVSLA---YQQILELALTQPCLRNTARYVVFDHGKMFFIDPLGEGFEKCDVVDVGDGK- 278

  Fly   232 ELWPGYETSI----------RQHEKDILLGTEIT-HKVMRTETIYDIMRRCSHNPARH------Q 279
            ::.||.:.:|          |.:...::.|.::. ||   .:.|.|.::..:..|..|      :
 Worm   279 QVVPGLKKTINFIEGPYGRGRSNPSVVIDGMKVAFHK---NQPILDKLKEITTQPVEHGLKGLEK 340

  Fly   280 DEVRVNVLDLIVLTDYNNRT--YRINDVDFGQTPKSTFSCK-GRDISFVEYYLTKYNIRIRDHNQ 341
            |.....:..|...:.|..|.  ::|..:.......:.|... |...:..:|:...|||.:|..:.
 Worm   341 DRCAAVIKGLDCYSTYGGRERHHKIEGIHHEGARNARFELNDGGSCTVAQYFEDVYNITLRYPDT 405

  Fly   342 PLLISKNRDKALKTNASELVVLIPELCRVTGLNAEMRSNFQLMRAM--SSYTRMNPKQRTDRLRA 404
            .|::||.|...                           ||..|..:  ||:.|:...|.|     
 Worm   406 NLIVSKERGNI---------------------------NFYPMELLKISSHQRVQIPQLT----- 438

  Fly   405 FNHRLQNTPESVKVLRDWNMEL---DKNVTEV--QGRIIGQQNI-------VFHNGKVPAGE--N 455
             :.:.|.|.:...||.|....|   .||..::  ...::|:..:       :.....:||.:  |
 Worm   439 -SAQSQKTTKESAVLPDVRQRLILTGKNAAQISSDNEVLGKMGVSVCEDPLMVKGRSIPAVKLAN 502

  Fly   456 AD------------WQRHFRDQRMLTTPSDGLDRWAVIAPQRNSHELRTLLDSLYRAA------- 501
            |:            |:.:     ..|.|:...:.||:...  .:...|..||:|.:.|       
 Worm   503 AEIGANPINVKDNKWRAN-----RFTRPATAPNVWAMYVV--GTASTRITLDTLKKFADEFAAMC 560

  Fly   502 SGMGLRIRSPQEF-IIYDD--RTGTYVRAMDDCVRSDPKLILCLVPNDNA----ERYSSIKKRGY 559
            ...|:.:.:|.:. :|:.|  .:..|.....:|.      .:.::.:|:.    :||..|:|   
 Worm   561 KSKGVNMPAPADISLIHMDAIESRLYDATKANCT------FVFIITDDSITTLHQRYKMIEK--- 616

  Fly   560 VDRAVPTQVVT--LKTTKNRSLMSIATKIAIQ-----LNCKLGYTPWMI---ELPLSGLMTIGFD 614
                 .|:::.  :|.:|..|:::...::.::     .|.|||.:.::.   :..|...:.||..
 Worm   617 -----DTKMIVQDMKLSKALSVINAGKRLTLENVINKTNVKLGGSNYVFVDAKKQLDSHLIIGVG 676

  Fly   615 IAKSTRDRKRAY---GALIASM-----DLQQNSTYFST-VTECSAFDVLANTLWPMIAKALRQYQ 670
            |:......|.|.   |.|..::     :.|.|..:... |...::.|.|| .:..::..:|.:||
 Worm   677 ISAPPAGTKYAMENKGVLNPNVIGYAYNAQHNQEFSGDFVLNSASQDTLA-PIEDIVMHSLNEYQ 740

  Fly   671 HEH-RKLPSRIVFYRDGVSSGSLKQLFEFEVKDIIEKLKTEYARVQL---SPP-QLAYIVVTRSM 730
            ..| ..||.|::.||.|.|.|:...:..:|:         ..||..:   ||. ||.||||::..
 Worm   741 KFHDGGLPRRVIVYRTGTSEGNHGSIMAYEI---------PLARAAMRDFSPDIQLVYIVVSKDH 796

  Fly   731 NTRFF------LNGQ-----------------------NPPPGTIVDDVITLPERYDFYLVSQQV 766
            :.|||      |..:                       |..||.:||.::|.|....|:|.|...
 Worm   797 SFRFFKPDLASLASRPQATSSTASRHSAMPAAPKAWDLNIAPGILVDSIVTNPACKQFFLNSHIT 861

  Fly   767 RQGTVSPTSYNVLYSSMGLSPEKMQKLTYKMCHLYYNWSGTTRVP----AVCQYAKKLATLVGTN 827
            .|||.....|.||.....:|...::.:|||:|||:......|.:|    ...:|||:     |.|
 Worm   862 LQGTAKTPLYTVLADDAKVSMTALEDITYKLCHLHQIVGLPTSLPTPLYVANEYAKR-----GRN 921

  Fly   828 L 828
            |
 Worm   922 L 922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
piwiNP_476875.1 PAZ 262..396 CDD:198017 26/144 (18%)
Piwi_piwi-like_Euk 382..826 CDD:240016 117/542 (22%)
wago-4NP_496751.1 PLN03202 67..897 CDD:215631 178/904 (20%)
PAZ_argonaute_like 316..426 CDD:239212 23/136 (17%)
Piwi 594..924 CDD:396649 85/358 (24%)

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