DRSC/TRiP Functional Genomics Resources

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Protein Alignment piwi and ppw-2

DIOPT Version :10

Sequence 1:NP_476875.1 Gene:piwi / 34521 FlyBaseID:FBgn0004872 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_491535.1 Gene:ppw-2 / 172152 WormBaseID:WBGene00004094 Length:975 Species:Caenorhabditis elegans


Alignment Length:1003 Identity:203/1003 - (20%)
Similarity:335/1003 - (33%) Gaps:311/1003 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PRIEASRERRALEEA-------------PRREGGPTERKPWG------------------DQYDY 78
            |.:..:.|.:...:|             |:....|||...:|                  :.|.|
 Worm    40 PTLPVTSEHKTAHDACIKRLEQLEIPPDPKIYPSPTEPGTFGSVTEVLTNVFGVEVHKTSNFYQY 104

  Fly    79 LNTRPAELVSKKGTDGVPVMLQTNFFRLKTKPEWRIVH----------YHV-----EFEPSIENP 128
            .....|||.|||...          |..|.|.:: |||          :|.     :|..|.||.
 Worm   105 SVHITAELSSKKEVT----------FTKKGKEDF-IVHDRHEKCSAILFHALNRFEDFFKSSENC 158

  Fly   129 RVRMGVLSNHANLLGSGYLFDGLQLFTTRKFEQEITVLSGKSKLDIEYKISIKFVGFISCAEPRF 193
            .:..|    .:.|..|..||:|:   .|.|.:.::..::|..       .::|.:..:.|.:...
 Worm   159 IIYDG----QSILFTSMNLFEGI---PTGKIKTKVFQINGAD-------TNLKDLMVLPCIKLEV 209

  Fly   194 LQVLNLILRRSMKGLNLELVGRNLFDPR------AKIEIREFKMELWPGYETS---IRQHEKDIL 249
            ....|.::     ..:||.:||...|..      |..:|.:..|..:...|||   :.:|.|...
 Worm   210 FPTKNPVV-----NFSLEDIGRRTSDSNIESVNMAYKQILDLAMSQYAIRETSKCVVFEHGKMFF 269

  Fly   250 L-----------------GTEITHKVMRT-ETIYDIMRRCSHNP---------ARHQDEVRVNVL 287
            :                 |.::...:.:| :.|.....|..:||         |.|.:::....|
 Worm   270 INPLQEGYAPCDIVEVGDGKQMKPGLKKTLQFIEGPYGRNQNNPSIVIDGMKVAFHMEQLVFQKL 334

  Fly   288 DLIVL------------------------TDYNNRT--YRINDVDFGQTPKSTFSCKGRDISFV- 325
            ..|..                        ::|..||  ::|..:.......:.|..:|.....| 
 Worm   335 SSITSNLANGITGSERERCAAVIKGLDCHSNYRGRTRHHKIESIHHEGAATARFELEGGGTCTVA 399

  Fly   326 EYYLTKYNIRIRDHNQPLLISKNRDKALKTNASELVVLIPELCRVTGLNAEMRSNFQLMRAMSSY 390
            .|:..||.|::|..|..|::.|.|. ||.....||:.:                           
 Worm   400 TYFKDKYKIQLRYPNANLIVCKERG-ALNFYPMELITI--------------------------- 436

  Fly   391 TRMNPKQRTDRLRAFNHRLQNTPESVKVLRDWNMEL------------DKNVTEVQGRIIGQQNI 443
               :|.||....:..:.:.|.|.:...||.|....|            :..|....|..:..:.:
 Worm   437 ---SPNQRVRITQQTSSQSQRTTKESAVLPDIRQRLIMTGKIAAKITAENEVLGKMGVTVCDEPL 498

  Fly   444 VFHNGKVPAGENADWQRHFRDQRMLTTPSDGLDRW-------AVIAP-------------QRNSH 488
            |.....:||...|.    |.....|..|.|  .:|       :.:||             |.|..
 Worm   499 VVKGRNLPAIRLAS----FETGEHLINPRD--CKWRPQRYNRSAVAPKVWALYGVGSPGSQMNRD 557

  Fly   489 ELRTLLDSLYRAASGMGLRIRSPQEF-IIYDDRTGTYVRAMDDCVRSDPKLILCLVPNDNA---- 548
            .:|...|.....:...|:....|.:. ::..|.....:|   :...:....:|| :..||.    
 Worm   558 VMRRFCDEFMNMSRSKGILFPPPGDVNLLTPDAIENRLR---EAANAGCTFVLC-ITEDNITCLH 618

  Fly   549 ERYSSIKKRGYVDRAVPTQVVT--LKTTKNRSLMSIATKIAIQ-----LNCKLG---YTPWMIEL 603
            ::|..|:..        ||::.  :|.:|..|:::.:.|:.::     .|.|||   |.....:.
 Worm   619 QKYKFIEHH--------TQMIVQDMKLSKALSVVNASKKLTLENVINKTNVKLGGSNYVYLDTKN 675

  Fly   604 PLSGLMTIGFDIAK---STRDRKRAYGALIASMDLQQNST-----YFSTVTECSAFDVLAN---- 656
            .|...:.||..|:.   .|:....:.|.|        |.|     |.....:..:.|.:.|    
 Worm   676 FLQEHLIIGVGISSPPPGTKYIMESRGIL--------NPTIVGFAYNGNGKQEFSGDFVLNAAGQ 732

  Fly   657 -TLWP---MIAKALRQYQHEH-RKLPSRIVFYRDGVSSGSLKQLFEFEVKDIIEKLKTEYARVQL 716
             |:.|   :::.:::.|:..| .|.|.||..||.|.|.|:...:..:||         ..|||.:
 Worm   733 ETIAPIEDIVSYSIKGYKKFHDGKAPKRITIYRSGSSEGNHGPIISYEV---------PLARVAM 788

  Fly   717 ---SP-PQLAYIVVTRSMNTRFF--------LNGQN-------------PP--------PGTIVD 748
               || .||.||||::....|||        ..|.|             ||        ||..||
 Worm   789 RNFSPDTQLLYIVVSKEHTYRFFKKESGGSSSGGSNSAGASNSGTLTSAPPKPWELNIGPGLTVD 853

  Fly   749 DVITLPERYDFYLVSQQVRQGTVSPTSYNVLYSSMGLSPEKMQKLTYKMCHLYYNWSGTTRVP-- 811
            ..:|.|....|:|.|....||:.....|.||.....:....:::.|:.:|||:......|.:|  
 Worm   854 YGVTNPACKQFFLNSHMTLQGSAKTPLYTVLADDRNIGMSALEEFTFNLCHLHQIVGLPTSIPTP 918

  Fly   812 --AVCQYAKKLATLVGTNLHSIPQNALE 837
              ...:|||:     |.||.:...||.|
 Worm   919 LYVANEYAKR-----GRNLWNEAINANE 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
piwiNP_476875.1 PAZ 262..396 CDD:198017 28/169 (17%)
Piwi_piwi-like_Euk 382..826 CDD:240016 115/544 (21%)
ppw-2NP_491535.1 PAZ 334..461 CDD:198017 27/157 (17%)
Piwi 604..934 CDD:396649 88/360 (24%)

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