DRSC/TRiP Functional Genomics Resources

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Protein Alignment LRIT3 and dpr3

DIOPT Version :9

Sequence 1:NP_940908.3 Gene:LRIT3 / 345193 HGNCID:24783 Length:679 Species:Homo sapiens
Sequence 2:NP_001014459.2 Gene:dpr3 / 3346208 FlyBaseID:FBgn0053516 Length:522 Species:Drosophila melanogaster


Alignment Length:520 Identity:88/520 - (16%)
Similarity:143/520 - (27%) Gaps:188/520 - (36%)


- Green bases have known domain annotations that are detailed below.


Human    86 LWVTYNSVASI-------DPSSFYNLKQLHELRLDGNSLAAFPWASLLDMPLLRTLDLHNNKITS 143
            ||...|.:|:.       |.|.            ||.:|:.|..:|....|.........:..:|
  Fly   123 LWPFCNGLAAAAASTGQPDDSG------------DGPTLSTFLSSSQSQSPSPPAASASASSPSS 175

Human   144 VPNEALRY----------LKNLAYLDLSSNRLTTLPPDFLESWTHLVSTPSGVLDLSPSRIILGL 198
            ..:.|:.:          .|:||:||.|..       ..|.:.|......||..|          
  Fly   176 FSSFAVAHGPQTEATNHTFKSLAFLDASFG-------SDLFAQTDAKRERSGAAD---------- 223

Human   199 QDNPWFCDCHISKMIELSKVVDPAIVLLDPLMTCSEPERLTGILFQRAELEHCLKPSVMTSATKI 263
                           |.|:..|.:..|  |:.....|..:||                .|..|: 
  Fly   224 ---------------EESQDADTSQSL--PIFDFGMPRNITG----------------RTGHTE- 254

Human   264 MSALGSNVLLRCDATGFPTPQITWTRSDS------SPVNYT-----VIQESPEEGVRWSIMSLTG 317
                   .:::|.........::|.|...      ....||     .:.|| ::...|: :.:..
  Fly   255 -------AIIKCRVDSLHDKSVSWIRKRDLHILTVGTATYTSDKRFQVTES-KDSREWT-LHVKA 310

Human   318 ISSKDAGDYKCKAKNLAGMSEAVVTVTVLGITTTPIPPDTSERTGDHPEWDVQPGSG-------R 375
            ..:||:|.|:|:......||.|      ..:....|.||........|:...:.||.       :
  Fly   311 PLAKDSGIYECQVNTEPKMSMA------FQLNIIEISPDAKAVISGPPDLHFKAGSAIILNCLVQ 369

Human   376 STSVSSASSYLWSSSFSPTSSFSASTLSPPSTASFSLSPFSSSTVSSTTTLSTSISASTTMANKR 440
            ..||.......|.......:.|.|....|...|.....|                          
  Fly   370 QPSVKDIGPIYWYRGEHMITPFDADDGQPEIPAGRGEHP-------------------------- 408

Human   441 SFQLHQGGKRNLKVAKNGSKLPPASTSKKEELALLDQTMLTETNAAIEN---------LRVVSET 496
                 ||              .|..||..:.::.:|..|...|..|:|:         || :|..
  Fly   409 -----QG--------------IPEDTSPNDIMSEVDLQMEFATRIAMESQLGDTLKSRLR-ISNA 453

Human   497 KESVTLTWNMINTTHNSAVTVLYSKYGGKDLLLLNADSSKNQVTIDGLEPGGQYMACVCPKGVPP 561
            :.:.|..:....||.:||..:::                    .|:...|.....:..||..:.|
  Fly   454 QTTDTGNYTCQPTTASSASVLVH--------------------VINDENPAAMQKSGACPCALGP 498

Human   562  561
              Fly   499  498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LRIT3NP_940908.3 LRR 1 56..79
leucine-rich repeat 59..82 CDD:275378
LRR_8 61..117 CDD:290566 8/37 (22%)
LRR 2 80..103 6/23 (26%)
leucine-rich repeat 83..106 CDD:275378 6/26 (23%)
LRR 3 104..128 5/23 (22%)
LRR_8 105..165 CDD:290566 14/69 (20%)
LRR_4 105..146 CDD:289563 7/40 (18%)
leucine-rich repeat 107..130 CDD:275378 5/22 (23%)
LRR 4 129..151 3/21 (14%)
LRR_4 131..170 CDD:289563 8/48 (17%)
leucine-rich repeat 131..154 CDD:275378 2/32 (6%)
LRR 5 152..175 7/22 (32%)
leucine-rich repeat 155..168 CDD:275378 5/12 (42%)
Ig 267..345 CDD:299845 16/88 (18%)
IG_like 267..345 CDD:214653 16/88 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 351..375 6/30 (20%)
FN3 486..550 CDD:214495 12/72 (17%)
dpr3NP_001014459.2 Ig 243..330 CDD:299845 18/112 (16%)
IG_like 243..329 CDD:214653 18/111 (16%)
Ig 350..464 CDD:299845 25/159 (16%)
IG_like <441..477 CDD:214653 8/56 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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