DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCAR and wasf2

DIOPT Version :10

Sequence 1:NP_001260368.1 Gene:SCAR / 34519 FlyBaseID:FBgn0041781 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001315119.1 Gene:wasf2 / 394056 ZFINID:ZDB-GENE-040426-865 Length:486 Species:Danio rerio


Alignment Length:675 Identity:224/675 - (33%)
Similarity:299/675 - (44%) Gaps:196/675 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLPKRSIEPVHVARSVYQQDELQSVELETVTNTTLTNIIRQLSSLSKHAEDVFGELARDVGNIG 65
            |||..|:|||.|:.|... .:.::| |||.|||.||.||||||.||||:||||||||........
Zfish     1 MPLVTRNIEPRHLCRQTL-PNTIKS-ELECVTNITLANIIRQLGSLSKYAEDVFGELFVQASKFA 63

  Fly    66 DRANSLQARIDRLAIKVTQLDSTVEEVPLTDITRKKAFKSAKVFDQQIFSRATMPAPMMDTYAQC 130
            ||..:|..|:|:|.:||||||...|||.|..||.:|||.|..:.|||:|.||::|.|:.|||..|
Zfish    64 DRVTTLGERVDKLQVKVTQLDPKEEEVSLQAITSRKAFHSNLIQDQQLFIRASLPQPINDTYLTC 128

  Fly   131 DKPPPLDKLNVYRDDGKDGLKFYTDPNYFFELWRQEMLKDTERVMHDKGKKLNRPRQDGGAGGAA 195
            |:|||||||:.||:|||:.|||||||:|||:||:::||:||:.::.:|.|  ::.::|..    .
Zfish   129 DQPPPLDKLSPYREDGKEALKFYTDPSYFFDLWKEKMLQDTKDIIKEKRK--HKKKKDDN----V 187

  Fly   196 GRGNKKQKTKIRVPHNTREQQRQRALVHGETLMPNNVIYRTPNSMVNEEAGYGIQLVKIQTVGEA 260
            .|.|...: ||:    ||:.:.:|..:..|.::|........:..:|            .::|..
Zfish   188 NRRNLNPR-KIK----TRKDEWERQKMGAEFVVPKTDALGNSSEALN------------GSIGSG 235

  Fly   261 DIDLRHSTLDAHHQVVGNIQDVDTVKPYNMLSHLENNSNVTKQTAVAIADMGVYDTRPPRPNSIE 325
            |....|:.                       |:||.::|...           ||...|.|...:
Zfish   236 DDGYMHTD-----------------------SYLEQSTNSYS-----------YDPGSPLPPPAQ 266

  Fly   326 LNRSYQSEQIDGSTYEQL--PPQMGNQYAATFGNGMGGPQQMHMQHQQMYDAGMYQSHALYGQTG 388
                           |..  ||....||     |..||                  :|...|   
Zfish   267 ---------------EDFPPPPPADTQY-----NESGG------------------AHTKRG--- 290

  Fly   389 QGVMSPEPIYGPGTPSRNKPRPSQPPPAPPSNGSGGGTPTASNANTPTRGRSMSTSRDALPPPPP 453
             .|:|                ||.|||||||..|..|..|.:....|             |||||
Zfish   291 -SVLS----------------PSHPPPAPPSMPSSPGRLTMAPPLAP-------------PPPPP 325

  Fly   454 VPDVISPMSGMNGVNSGHMAAKLLGRANSSSGAGSPNSVQNANDMVMTQLSNTFHSIGMTGNQLN 518
            ...:|.|...:                    |..||.|..                 ..|||.::
Zfish   326 PGGMIPPPPPL--------------------GFDSPPSPP-----------------PFTGNAVS 353

  Fly   519 SLSDLPPPPPVPDQHSPKMSPPNAA----PPPPPPPPPVEEGMGSGNQHTLRPHQILPKSLANGE 579
                :|||||: |...|...||..|    |||||||||.....|.            |...|.| 
Zfish   354 ----IPPPPPM-DLSIPAPPPPPMAGGPPPPPPPPPPPGPPPPGP------------PPPSAPG- 400

  Fly   580 MQQPGQQNGVPHIVAPK-KMLPPFHDPRNDLMKAIRDGITLRKVEKSEQKEIERNAAPLDVASIL 643
               |....||....||| :..|...|.|:||:.|||.|..|||||:..::| :|:....|||:||
Zfish   401 ---PPPSAGVSAPSAPKAQPAPAAGDARSDLLAAIRQGFNLRKVEEQREQE-KRDHNGNDVAAIL 461

  Fly   644 ARRVAIELSESEDSDSEDDSEGWME 668
            :||:|:|.|:|||..||.|.:.|.:
Zfish   462 SRRIAVECSDSEDDSSEFDDDDWSD 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCARNP_001260368.1 WH2 599..>650 CDD:425359 24/50 (48%)
wasf2NP_001315119.1 WH2 423..>468 CDD:425359 23/45 (51%)

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