DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SCAR and wasf2

DIOPT Version :9

Sequence 1:NP_001260368.1 Gene:SCAR / 34519 FlyBaseID:FBgn0041781 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001315119.1 Gene:wasf2 / 394056 ZFINID:ZDB-GENE-040426-865 Length:486 Species:Danio rerio


Alignment Length:675 Identity:224/675 - (33%)
Similarity:299/675 - (44%) Gaps:196/675 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLPKRSIEPVHVARSVYQQDELQSVELETVTNTTLTNIIRQLSSLSKHAEDVFGELARDVGNIG 65
            |||..|:|||.|:.|... .:.::| |||.|||.||.||||||.||||:||||||||........
Zfish     1 MPLVTRNIEPRHLCRQTL-PNTIKS-ELECVTNITLANIIRQLGSLSKYAEDVFGELFVQASKFA 63

  Fly    66 DRANSLQARIDRLAIKVTQLDSTVEEVPLTDITRKKAFKSAKVFDQQIFSRATMPAPMMDTYAQC 130
            ||..:|..|:|:|.:||||||...|||.|..||.:|||.|..:.|||:|.||::|.|:.|||..|
Zfish    64 DRVTTLGERVDKLQVKVTQLDPKEEEVSLQAITSRKAFHSNLIQDQQLFIRASLPQPINDTYLTC 128

  Fly   131 DKPPPLDKLNVYRDDGKDGLKFYTDPNYFFELWRQEMLKDTERVMHDKGKKLNRPRQDGGAGGAA 195
            |:|||||||:.||:|||:.|||||||:|||:||:::||:||:.::.:|.|  ::.::|..    .
Zfish   129 DQPPPLDKLSPYREDGKEALKFYTDPSYFFDLWKEKMLQDTKDIIKEKRK--HKKKKDDN----V 187

  Fly   196 GRGNKKQKTKIRVPHNTREQQRQRALVHGETLMPNNVIYRTPNSMVNEEAGYGIQLVKIQTVGEA 260
            .|.|...: ||:    ||:.:.:|..:..|.::|........:..:|            .::|..
Zfish   188 NRRNLNPR-KIK----TRKDEWERQKMGAEFVVPKTDALGNSSEALN------------GSIGSG 235

  Fly   261 DIDLRHSTLDAHHQVVGNIQDVDTVKPYNMLSHLENNSNVTKQTAVAIADMGVYDTRPPRPNSIE 325
            |....|:.                       |:||.::|...           ||...|.|...:
Zfish   236 DDGYMHTD-----------------------SYLEQSTNSYS-----------YDPGSPLPPPAQ 266

  Fly   326 LNRSYQSEQIDGSTYEQL--PPQMGNQYAATFGNGMGGPQQMHMQHQQMYDAGMYQSHALYGQTG 388
                           |..  ||....||     |..||                  :|...|   
Zfish   267 ---------------EDFPPPPPADTQY-----NESGG------------------AHTKRG--- 290

  Fly   389 QGVMSPEPIYGPGTPSRNKPRPSQPPPAPPSNGSGGGTPTASNANTPTRGRSMSTSRDALPPPPP 453
             .|:|                ||.|||||||..|..|..|.:....|             |||||
Zfish   291 -SVLS----------------PSHPPPAPPSMPSSPGRLTMAPPLAP-------------PPPPP 325

  Fly   454 VPDVISPMSGMNGVNSGHMAAKLLGRANSSSGAGSPNSVQNANDMVMTQLSNTFHSIGMTGNQLN 518
            ...:|.|...:                    |..||.|..                 ..|||.::
Zfish   326 PGGMIPPPPPL--------------------GFDSPPSPP-----------------PFTGNAVS 353

  Fly   519 SLSDLPPPPPVPDQHSPKMSPPNAA----PPPPPPPPPVEEGMGSGNQHTLRPHQILPKSLANGE 579
                :|||||: |...|...||..|    |||||||||.....|.            |...|.| 
Zfish   354 ----IPPPPPM-DLSIPAPPPPPMAGGPPPPPPPPPPPGPPPPGP------------PPPSAPG- 400

  Fly   580 MQQPGQQNGVPHIVAPK-KMLPPFHDPRNDLMKAIRDGITLRKVEKSEQKEIERNAAPLDVASIL 643
               |....||....||| :..|...|.|:||:.|||.|..|||||:..::| :|:....|||:||
Zfish   401 ---PPPSAGVSAPSAPKAQPAPAAGDARSDLLAAIRQGFNLRKVEEQREQE-KRDHNGNDVAAIL 461

  Fly   644 ARRVAIELSESEDSDSEDDSEGWME 668
            :||:|:|.|:|||..||.|.:.|.:
Zfish   462 SRRIAVECSDSEDDSSEFDDDDWSD 486



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596167
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1830
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 304 1.000 Inparanoid score I2631
OMA 1 1.010 - - QHG54445
OrthoDB 1 1.010 - - D1183697at2759
OrthoFinder 1 1.000 - - FOG0000853
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12902
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X835
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.870

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