DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SCAR and Wmp

DIOPT Version :9

Sequence 1:NP_001260368.1 Gene:SCAR / 34519 FlyBaseID:FBgn0041781 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001028424.1 Gene:Wmp / 213450 MGIID:2685578 Length:516 Species:Mus musculus


Alignment Length:489 Identity:100/489 - (20%)
Similarity:154/489 - (31%) Gaps:158/489 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 NSIELNRSYQSEQ--IDGSTY----------------EQLP----PQMGNQYAATFGNGM-GGPQ 363
            |::.:|:...||:  |.....                |.:|    |..||:.:.::.:.. ||..
Mouse    44 NNVSMNKGQTSEKKHIQNQNINHAGDFKNVLQCQLLKEHIPVDHIPASGNEESHSYLDQYDGGSS 108

  Fly   364 QMHMQHQQMYDAGMYQSHAL-------YGQTGQGVMS-PEPIYGPG----------TPSRNK--- 407
            ....|..:....|.|.::.|       |...|....| |..:||.|          |.:..|   
Mouse   109 SYIFQSNRNKCQGRYAANDLPDVQDHFYHCIGHVSKSQPRVLYGIGKGGVVLRQGPTLAHYKSNV 173

  Fly   408 ---PRPSQPPPAPPS---NGSGGGTPTASNANTPTRGRSMST-----SRDALPPPPP-------- 453
               |...:.||.|..   .......|:|....:..|.|..|:     ....|||...        
Mouse   174 FVNPLAPEAPPLPSDWLIQLISSKRPSAHGVVSSRRSRGTSSLLVLERTTTLPPASSKSNPNIDL 238

  Fly   454 --VPDV-------------ISPMSGMN--GVN--------------------------------- 468
              :|:|             :....|:|  |:|                                 
Mouse   239 IMLPEVEFTATSESLEYYELQKQGGLNPQGLNQEIALLVHPSVIPLKNQSWDSIVDLIDSSLVLN 303

  Fly   469 ------SGHMAAKLLGRANSSSGAGSPNSVQNANDMVMTQLSNT------FHSIGMTGNQLNSLS 521
                  |...:.:...::||..|:.|||.|.|.:.:..||...:      |.|:        ..|
Mouse   304 TQSIKSSFPKSPRSPSKSNSEHGSLSPNPVANTSRISTTQSPRSYRVPCCFSSV--------PAS 360

  Fly   522 DLPPPP----PVPD---QHSPKMSPPNAAPPPPPPPPPVEEGMGSGNQHTLRPHQILPKSLANGE 579
            ..|.|.    |:|:   .|..|:....:..|.......:.......:..||.....|..||::.:
Mouse   361 QSPKPQITLNPLPEHSVSHLIKLIEAQSKLPMTLSKRQLHPPQAKLSSFTLSEVSTLQSSLSSMK 425

  Fly   580 MQQPGQ----------QNGVPHIVAPKKMLPPFHDPRNDLMKAIRDGITLRKVEKSEQKEIERNA 634
            ....||          ::....|:.....||....|||:||:.||.||.|.|.:...:.|...|.
Mouse   426 SSISGQRALKIRQYTIESAYASIMQTPSSLPIMTKPRNELMEEIRKGIKLHKTQPRPENEDLENG 490

  Fly   635 APLDVASILARRVAIELSESEDSDSEDDSEGWME 668
            |.:    |..||.|:.. .||.||||.:   |:|
Mouse   491 AEM----IRVRRKAMGY-HSEKSDSETE---WIE 516



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850265
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1830
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12902
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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