DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCAR and SCAR

DIOPT Version :10

Sequence 1:NP_001260368.1 Gene:SCAR / 34519 FlyBaseID:FBgn0041781 Length:674 Species:Drosophila melanogaster
Sequence 2:XP_061517179.1 Gene:SCAR / 1277451 VectorBaseID:AGAMI1_009440 Length:654 Species:Anopheles gambiae


Alignment Length:753 Identity:399/753 - (52%)
Similarity:464/753 - (61%) Gaps:178/753 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLPKRSIEPVHVARSVYQQDELQSVELETVTNTTLTNIIRQLSSLSKHAEDVFGELARDVGNIG 65
            ||||||.::||.||||||.::||.: |||||||||||||:||||||||||||:|||||||.|.:.
Mosquito     1 MPLPKRLVQPVFVARSVYVREELPA-ELETVTNTTLTNIVRQLSSLSKHAEDLFGELARDAGGLA 64

  Fly    66 DRANSLQARIDRLAIKVTQLDSTVEEVPLTDITRKKAFKSAKVFDQQIFSRATMPAPMMDTYAQC 130
            :||||||||||||||||||||||||||.|.||..|||||||.:||||||||||||:.|::.|..|
Mosquito    65 ERANSLQARIDRLAIKVTQLDSTVEEVSLQDIQMKKAFKSATMFDQQIFSRATMPSAMLEVYKTC 129

  Fly   131 DKPPPLDKLNVYRDDGKDGLKFYTDPNYFFELWRQEMLKDTERVMHDKGKKLNRPRQDGGAGGAA 195
            ||||||||||.||||||||||||||||||||||||||||||||||||:|||:::||.||||.|..
Mosquito   130 DKPPPLDKLNCYRDDGKDGLKFYTDPNYFFELWRQEMLKDTERVMHDRGKKVHKPRADGGADGGG 194

  Fly   196 GRGNKKQKTKIRVPHNTREQQRQRALVHGETLMPNNVIYRTPNSMV--NEEAGYGIQLVKIQTVG 258
                 :||.:.|.||||||:|||||:.||||||||||||||||:::  .|||.|           
Mosquito   195 -----RQKKRPRAPHNTREKQRQRAIGHGETLMPNNVIYRTPNAIIGSQEEAIY----------- 243

  Fly   259 EADIDLRHSTLDAHHQVVGNIQDVDTVKPYNMLSHLENNSNVTKQTAVAIADMG---VYDTR--- 317
                                                  ||        |:|..|   :||:|   
Mosquito   244 --------------------------------------NS--------AMAAAGGSMIYDSRSSS 262

  Fly   318 -----------PPRPNSIELNRSYQ--SEQIDGSTYEQLPPQMGNQYAATFGNGMGGPQQMHMQH 369
                       ..|||||||.||||  :|.:||..|  .||..        |.|.|..|||.:|.
Mosquito   263 AMGGSSSGGGGAARPNSIELRRSYQQPNEMVDGGGY--APPSP--------GGGGGYHQQMAVQM 317

  Fly   370 QQMYDAGMYQSHALYGQ---------TGQGVMSPEPIYGPGTPSRNKPRPSQPPPAPPSNGSGGG 425
            ||  ..|:||...:|.|         .|...||.|.:|.||||||:|.|||||||||||:|||||
Mosquito   318 QQ--GGGVYQQQPIYDQYGNPSAMYGAGTNQMSQESLYAPGTPSRSKSRPSQPPPAPPSSGSGGG 380

  Fly   426 TPTASNANTPTRGRSMSTSRDALPPPPPVPDVI-SPMSGM-NGVNSGHMAAKLLGRANSSSGAGS 488
            ||.|||||||||.||:||.||.||||||:|:.: ||..|: ||..|  :||||| ...|.|.|||
Mosquito   381 TPNASNANTPTRSRSLSTGRDNLPPPPPIPEGLQSPPHGLSNGGTS--VAAKLL-LNRSGSRAGS 442

  Fly   489 P----------------------------------NSVQNANDMVMTQLSNTFHSIGMTGNQLN- 518
            |                                  .|:.:.|.:.:.||:...:::.....||| 
Mosquito   443 PQLGMTGGPQQQQQQHQQQQQQQQPQHHHQQQVVVQSMMDQNQIALAQLNQQINNLNNLNMQLNQ 507

  Fly   519 -SLSDLPPPPPVPDQHSPKMSPPNAAPPPPPPPPPVEEGMGSGNQHTLRPHQILPKSLANGEMQQ 582
             |::|||||||:|:|.|||.||||.||||||||||:.:|       .|.|.:   ..:|||::..
Mosquito   508 MSMNDLPPPPPIPEQLSPKQSPPNVAPPPPPPPPPMLDG-------PLSPSK---APVANGDLYN 562

  Fly   583 PGQQNGVPHIVAPK----KMLPP-----FHDPRNDLMKAIRDGITLRKVEKS--EQKEIERNAAP 636
                       .||    |.:||     :.|||:||||||||||.||||||.  |.||.:||...
Mosquito   563 -----------MPKMHQLKKIPPQEKITYDDPRSDLMKAIRDGIKLRKVEKQNHEAKENDRNKGL 616

  Fly   637 LDVASILARRVAIELSESEDSDSEDDSEGWMEPNETSA 674
            .||||||||||||||||||.|:|:||||||.|.|||||
Mosquito   617 HDVASILARRVAIELSESESSESDDDSEGWQETNETSA 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCARNP_001260368.1 WH2 599..>650 CDD:425359 37/57 (65%)
SCARXP_061517179.1 None

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