DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCAR and wasf1

DIOPT Version :9

Sequence 1:NP_001260368.1 Gene:SCAR / 34519 FlyBaseID:FBgn0041781 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001096217.1 Gene:wasf1 / 100124768 XenbaseID:XB-GENE-978145 Length:558 Species:Xenopus tropicalis


Alignment Length:753 Identity:225/753 - (29%)
Similarity:309/753 - (41%) Gaps:280/753 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLPKRSIEPVHVARSVYQQDELQSVELETVTNTTLTNIIRQLSSLSKHAEDVFGELARDVGNIG 65
            |||.||:|:|.|:..:...:....  |||.|||.:|.|||||||||||:|||:||||..:..:..
 Frog     1 MPLVKRNIDPRHLCHTALPRGIKN--ELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFS 63

  Fly    66 DRANSLQARIDRLAIKVTQLDSTVEEVPLTDITRKKAFKSAKVFDQQIFSRATMPAPMMDTYAQC 130
            .|.||||.|:|||::.|||||...||:.|.|||.:|||:|:.:.|||:|.|.|:|.|:.:||..|
 Frog    64 FRVNSLQERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFHRKTLPIPLHETYEIC 128

  Fly   131 DKPPPLDKLNVYRDDGKDGLKFYTDPNYFFELWRQEMLKDTERVMHDKGKKLNRPRQDGGAGGAA 195
            :.||||:.|..||||||:||||||:|:|||:||:::||:|||    ||.|:..:.:|..     .
 Frog   129 EHPPPLNILTPYRDDGKEGLKFYTNPSYFFDLWKEKMLQDTE----DKRKEKRKQKQKN-----I 184

  Fly   196 GRGNKKQKTKIRVPHNTREQQRQRALVHGETLMPNNVIYRTPNSMVNEEAGYGIQLVKIQTVGEA 260
            .|..:.:|.. |.||:.|.:.::.|                          .|::|      .|.
 Frog   185 DRPYELEKVP-RAPHDRRREWQKLA--------------------------QGLEL------AED 216

  Fly   261 DIDLRHSTLDAHHQVVGNIQDVDTVKPYNMLSHLENNSNVTKQTAVAIADMGVYDTRPPRPNSIE 325
            |:||.     .||:                  |:|          :|......:|.||       
 Frog   217 DVDLH-----LHHK------------------HIE----------IANGPASHFDARP------- 241

  Fly   326 LNRSYQSEQIDGSTYEQLPPQMGNQYAATFGNGMGGP--------QQMHMQHQQMYDAGMYQSHA 382
                                       ..:|..|.||        .||:....::.|..:.:.|.
 Frog   242 ---------------------------QAYGENMDGPFSLAALPFSQMNDLLNRVEDRVLVRPHE 279

  Fly   383 LYGQTGQGVMSPEPIYGPG-----------TPSRNKPR--------------PSQPPPAPPSNGS 422
                    ...|.|::.||           ||..|:.|              ||.|||.||....
 Frog   280 --------PPPPPPVHAPGDGKAMPQIISATPGLNENRPQSPAMGRTPGFASPSPPPPPPPLPPP 336

  Fly   423 GGGTPTASNANTPTRGRSMSTSRDALPPPPPVPDVISPMSGMNGVNSGHMAAKLLGRANSSSGAG 487
            ....|:|.:|:: .|....||....:|||||.|                                
 Frog   337 PPPLPSALSASS-LRSSISSTPPPPIPPPPPPP-------------------------------- 368

  Fly   488 SPNSVQNANDMVMTQLSNTFHSIGMTGNQLNSLSDLPPPPPVPDQHSPKM---SPPNAAPP---- 545
                        .|.:..|                :.||||.|.|.:|.:   :||..|||    
 Frog   369 ------------TTTIQTT----------------VVPPPPTPLQIAPGVLHPAPPPIAPPLVQA 405

  Fly   546 ------------------------PPPPPPPVEEGMGSGNQHTLRPHQILPKS-LANGEMQQPGQ 585
                                    |||||||           .|.|..:.|.| :|...:..|| 
 Frog   406 SPPVTRVTQISENAPAPQIEAAGLPPPPPPP-----------PLPPPGMRPSSPIAVPPLSHPG- 458

  Fly   586 QNGVPHIVA-----------------PKK---MLPPFHDPRNDLMKAIRDGITLRKVEKSEQKEI 630
              |..|.||                 ||:   .||...|.|:.|::|||.||.|||||:..::|.
 Frog   459 --GAVHPVASIVPGSHVPSPPSQAPEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEA 521

  Fly   631 ERNAAPLDVASILARRVAIELSESEDSDSEDDSEGWME 668
            :......|||:||:||:|:|.|:||| |||.|...|:|
 Frog   522 KHERIENDVATILSRRIAVEYSDSED-DSEFDEVEWLE 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCARNP_001260368.1 None
wasf1NP_001096217.1 PRK07764 <405..>533 CDD:236090 39/141 (28%)
WH2 496..513 CDD:128542 9/16 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 229 1.000 Domainoid score I2420
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 266 1.000 Inparanoid score I2970
OMA 1 1.010 - - QHG54445
OrthoDB 1 1.010 - - D1183697at2759
OrthoFinder 1 1.000 - - FOG0000853
OrthoInspector 1 1.000 - - otm49233
Panther 1 1.100 - - O PTHR12902
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4420
SonicParanoid 1 1.000 - - X835
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.110

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