DRSC/TRiP Functional Genomics Resources

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Protein Alignment YL-1 and vps72b

DIOPT Version :9

Sequence 1:NP_001285823.1 Gene:YL-1 / 34516 FlyBaseID:FBgn0032321 Length:351 Species:Drosophila melanogaster
Sequence 2:XP_009290675.1 Gene:vps72b / 795272 ZFINID:ZDB-GENE-100922-13 Length:374 Species:Danio rerio


Alignment Length:379 Identity:144/379 - (37%)
Similarity:202/379 - (53%) Gaps:52/379 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAASRSRRNNAGNKIAHLLNEEEEDDFYKTSYGGFQEDEEDKEYE-QKDEEEDVVDSDFSIDEND 64
            :|.||:.|..|||:::.||:.||||:||||:||||.::..|:||: ...|.||.|||||.|||.|
Zfish     3 LAFSRAPRKTAGNRMSRLLDAEEEDEFYKTTYGGFHDESGDEEYKGDLTETEDEVDSDFDIDEGD 67

  Fly    65 EPVSDQEEAPEKKRKRGVVNTKAYKETKPAVKKETK--ATPALHKKRPGGGVTKRRPRPRFTVLD 127
            ||.|:|||...:::.|  |.||||||....|:::.|  ....|.::.....:.|..| |.... |
Zfish    68 EPDSEQEEDGPRRKSR--VVTKAYKEPVKVVRQKPKQRKLAELPRRTDKTKIDKYNP-PELQD-D 128

  Fly   128 SGRKSIRTSTAIKTQATKIRLKELDDARKRKKKKVRVEDYMPTQEELLEEAKITEEENTKSLEKF 192
            ..|||:|.||...|:.|.:||:|...| .|::|..|.|..: ||.|||.|||:|.|.|.:|||.:
Zfish   129 INRKSVRQSTTEHTRLTYLRLQERQVA-PRRRKGTRHERPL-TQAELLAEAKVTAEINLRSLENY 191

  Fly   193 QKMELEKKKSRPTKRTFSGPTIRYHSLTMP--------------------AMRKP---------- 227
            :::|.:||:....||...|..|||||:.||                    |.:.|          
Zfish   192 ERLEADKKRQVHMKRQCVGSVIRYHSVLMPLVSDVTLKEENVDVEGLDQDAQQNPHLPQALSQSE 256

  Fly   228 -TRGANPAVDSKDLAG---KCERTFVTIENDFNDKVFQSLFRHKAPPKAS-NGICPITRLPARYF 287
             |..|.|.|...:.|.   ||.||::|..   :|:.||.:|.....|:.. ..:||:|..||.|.
Zfish   257 STLSAAPGVPFTNTAAVNTKCSRTYITFS---DDESFQRVFPQSPAPRVPVQEVCPVTHKPALYR 318

  Fly   288 DPITQQPYYSIQAFKILREAYYMQLEQQG---GGSEQP--ELAKWLEWRKLVKE 336
            ||||..||.::|||:|:||||...:...|   .|...|  ..||.|:.:.::|:
Zfish   319 DPITDIPYANVQAFRIIREAYKKYVAAHGLPCTGPSTPADTTAKSLKQKIIIKQ 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YL-1NP_001285823.1 YL1 3..218 CDD:283433 95/217 (44%)
LTV <20..>75 CDD:282087 33/55 (60%)
YL1_C 276..304 CDD:198061 15/27 (56%)
vps72bXP_009290675.1 YL1 6..217 CDD:283433 95/216 (44%)
YL1_C 307..335 CDD:285465 15/27 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587247
Domainoid 1 1.000 170 1.000 Domainoid score I3743
eggNOG 1 0.900 - - E1_KOG2897
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 220 1.000 Inparanoid score I3538
OMA 1 1.010 - - QHG59697
OrthoDB 1 1.010 - - D1468037at2759
OrthoFinder 1 1.000 - - FOG0005752
OrthoInspector 1 1.000 - - otm24601
orthoMCL 1 0.900 - - OOG6_104390
Panther 1 1.100 - - O PTHR13275
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5466
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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