DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7309 and hoe1

DIOPT Version :10

Sequence 1:NP_609468.4 Gene:CG7309 / 34509 FlyBaseID:FBgn0032314 Length:528 Species:Drosophila melanogaster
Sequence 2:NP_608876.1 Gene:hoe1 / 249663 FlyBaseID:FBgn0041150 Length:846 Species:Drosophila melanogaster


Alignment Length:605 Identity:109/605 - (18%)
Similarity:207/605 - (34%) Gaps:182/605 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GDIPLEEQDDRRLFCKYHYKGVLLLFIPILLAPILIGTPVLICRFIYLTLCLYLIYILNLMARGA 74
            |::||:...|....  |...||      |..|.:|.|              ||::.|..::.|..
  Fly   323 GELPLQLNVDESPI--YKRDGV------IYAAAVLCG--------------LYVMIIWEIVNRTF 365

  Fly    75 AAFIYMVFIPVAGIASSKEISVSYYT-------DLIFFVYSAIFMGIMMDSSKLSDRLAFIVISL 132
            ||.|....  ..||.::.....|..|       :.:..::..:.:..::..:.:.|.||.....:
  Fly   366 AAIIASTL--SVGILAALNSRPSMATIMGWIDVETLLLLFGMMILVAILSETGVFDYLAVYAYKI 428

  Fly   133 VGGSLKFLQIFLTIAAAIVSILVNPTISAAFWMKVSQAVMVEYDNGGLIKLNSEEKPYEIGSKPY 197
            ..|.:..|...|.:..|::|..:: .::....|......:.|     ::.||           |.
  Fly   429 TNGHVWPLINCLCLFTAVLSSFLD-NVTTVLLMTPVTIRLCE-----VMCLN-----------PV 476

  Fly   198 PTRPVIGIYLTCCYAASLAASLSPIVNPNGVI--SDGF----GGSLTVLEIGMLMAGPALMGLVV 256
            |....:.||      :::..:|:|:.:|..||  |:.:    |.:..|..:.||   |.:: ||:
  Fly   477 PILMCMVIY------SNIGGALTPVGDPPNVIIASNSYISKNGVNFAVFTLHML---PGVL-LVM 531

  Fly   257 MIFWLQVLF--------------------------------------------------LGLLGG 271
            :..::|:.|                                                  :..|..
  Fly   532 VQTYIQLRFKFRNISDLQFKDSPEVEELRHEIHVWKRAAASLSAYSKDEELVRQTLMKKVNRLKR 596

  Fly   272 SVKRDLAEMAGAKAGFKQTASERKQALGPWGIYPIL-----ALSLILLMFLLVATRK-PRIFTGW 330
            |:|:.:..:......::||.: ..||..|....|:|     ||..::.:|.|.:..: .|:..||
  Fly   597 SLKKRMTAVIEPAPNYQQTLA-NLQAKYPIRNKPLLIKCSAALVFVISLFFLHSVPELQRLSLGW 660

  Fly   331 DSINYKAESGLSVAGIGMSILFFAIPANYIFCRYYVCRQPEKEGPANSLLGWKAVNNNTPWAEIF 395
            .::              :..:|..|.|:                    :...:|:.....|:.:.
  Fly   661 TAL--------------LGAIFLIILAD--------------------IEDMEAILARVEWSTLL 691

  Fly   396 MLGAAFSFSYSSAVCGLNTYLADSMNSDNKGFNMKSFICGALLGTLWTTLSPATTVAKLALPTMV 460
            ...|.|....:....||..::.:.......|......:..|:|..||.:...:..|..:.|.||:
  Fly   692 FFAALFILMEALTELGLIEWIGNMTEGIILGVGEDRRLMVAILIILWVSAVASAFVDNIPLTTMM 756

  Fly   461 T------AGNS-FSLP-----FATAL-----HNQFLLPVSSPANTIVAGWGNVRPFQFLLGGSIL 508
            .      |.|| .:||     :|.||     .|..|:..|  ||.:.||......::|       
  Fly   757 VKITISLAQNSTLNLPLQPLVWALALGACLGGNGTLIGAS--ANVVCAGVAEQHGYKF------- 812

  Fly   509 TLFMFCTIAGFTILFRTMVL 528
            |...|..: ||.|:..::::
  Fly   813 TFLQFFKV-GFPIMIGSIIV 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7309NP_609468.4 CitT 108..523 CDD:440239 87/493 (18%)
hoe1NP_608876.1 geminin-like_CC 68..>118 CDD:459243
P_permease 349..837 CDD:238536 100/571 (18%)
Blue background indicates that the domain is not in the aligned region.

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