DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stam and AT1G21380

DIOPT Version :10

Sequence 1:NP_477448.1 Gene:Stam / 34505 FlyBaseID:FBgn0027363 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_564138.1 Gene:AT1G21380 / 838737 AraportID:AT1G21380 Length:506 Species:Arabidopsis thaliana


Alignment Length:681 Identity:121/681 - (17%)
Similarity:222/681 - (32%) Gaps:257/681 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ADVEKATSETNTNDNWSLILDVCDKVTTNPRLAKDCLKAVMRRMGHTDPHVVMQAITLLDALSNN 76
            |..|:||::.....:|::.:::||.:...|..||:.:|.:.:|:|..:..|.:.|:..|:.||.|
plant     7 ACAERATNDMLIGPDWAINIELCDIINMEPSQAKEAVKVLKKRLGSKNSKVQILALYALETLSKN 71

  Fly    77 CGKPLHLEVASRDFETEFRRLLAKAQPKVSL--KMRQVLKNWAE---------NDYKNDRELDLI 130
            ||:.::..:..||...:..::: |.:|.:::  |:..:|..|.|         ..|.|       
plant    72 CGESVYQLIVDRDILPDMVKIV-KKKPDLTVREKILSLLDTWQEAFGGSGGRFPQYYN------- 128

  Fly   131 PALYAKLRQEGYDFKNLGDKT--------SKTVAEKAAALPKDPNVVSSQQEEDDIAKAIELSLK 187
              .|.:||..|.:|....:.:        ::.:..:|.|..:|..:.:|.|.:|    |..||::
plant   129 --AYNELRSAGIEFPPRTESSVPFFTPPQTQPIVAQATASDEDAAIQASLQSDD----ASALSME 187

  Fly   188 ENKGSPKTGSVASTGTASAYPSLYPSFAGTGSSAPSAEASSAPAPEPRKVRALYDFEAAEENELT 252
            |.:.:..:..|.:....:..||                     .||..|...:.|.  .|:    
plant   188 EIQSAQGSVDVLTDMLGALDPS---------------------HPEGLKEELIVDL--VEQ---- 225

  Fly   253 FFAGEIIHVLDDSDPNWWKGYNQRGEGLFPSNFVTADLSVDPERLDINQ------QHKSAAAAGQ 311
                             .:.|.:|...|..:   |:|..:..:.|.:|.      ||....|.|.
plant   226 -----------------CRTYQRRVMALVNT---TSDEELMCQGLALNDNLQRVLQHHDDKAKGN 270

  Fly   312 RELDSAAALQQKTEAAAAAAAAQPVEIDESKIDRLLHLLHEANPEDPSQDSDEMLQLEQEVHQMG 376
                           :..|.|..|:.            |...|.:|...:||:            
plant   271 ---------------SVPATAPTPIP------------LVSINHDDDDDESDD------------ 296

  Fly   377 PLIDAELERVDRKHAQLTQLSSDLVDAINLYHTLMRDDRAAAGHFAAAAGGFMPGLAGFPGAALY 441
                                     |.:.|.|...|:.....|.                     
plant   297 -------------------------DFLQLAHRSKRESARGTGQ--------------------- 315

  Fly   442 GAPGYPAAGGFPPAQNYPGMHSMPYGPVPNPPTSAPSQAPGAPGGYLGQPQGQVPLPYQNGHAAQ 506
                    |.|.|.             :|.||:|                  ..|:...:|   .
plant   316 --------GNFNPI-------------LPPPPSS------------------MRPVHVDSG---A 338

  Fly   507 MNSLPAHLTQPTGTAPMPQPIYTQPTPVTTQQQ----------QQPLPQHPQQPPQQQGQQPPQH 561
            |:.|       :|....||..:....|.:|.|.          .:|:||          .:.|:|
plant   339 MDFL-------SGDVYKPQETFENVKPPSTSQSSNHDYSAPIFDEPVPQ----------SKSPEH 386

  Fly   562 PQNSYHIDPQSQYAQVPPAVTQIQQPQQ-PPAPHA----------YMSPQHQQAPPPQGYQPGPN 615
            ...:..:..|::  |:|||..:.|:|:: ||:..|          :..|||..:.....|.   :
plant   387 ALFTKPVYDQTE--QLPPAPWETQEPRKYPPSMSARTNKRPEYFQHNVPQHSSSASESSYD---D 446

  Fly   616 LYGPNGSPAVVNPQSYMSPQQQQQQHPPPHD 646
            |.|.:.:.: :||.:..:|....::...|.|
plant   447 LLGQSRNLS-LNPTASAAPVTPPKKDDKPED 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StamNP_477448.1 VHS_STAM 10..141 CDD:340770 34/139 (24%)
SH3_STAM 235..288 CDD:212754 6/52 (12%)
GAT_STAM 337..413 CDD:410593 8/75 (11%)
PHA03247 <436..526 CDD:223021 13/89 (15%)
AT1G21380NP_564138.1 VHS 10..135 CDD:340765 32/134 (24%)
GAT_GGA-like_plant 188..265 CDD:410579 18/123 (15%)

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