DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stam and AT5G01760

DIOPT Version :10

Sequence 1:NP_477448.1 Gene:Stam / 34505 FlyBaseID:FBgn0027363 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_195796.2 Gene:AT5G01760 / 831682 AraportID:AT5G01760 Length:542 Species:Arabidopsis thaliana


Alignment Length:610 Identity:120/610 - (19%)
Similarity:197/610 - (32%) Gaps:178/610 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VEKATSETNTNDNWSLILDVCDKVTTNPRLAKDCLKAVMRRMGHTDPHVVMQAITLLDALSNNCG 78
            |:|||||.....:|::|:.:||.:.:|....||.:|||.||:.|....|.:..:|||:|:..|||
plant    26 VDKATSELLRTPDWTIIIAICDSLNSNRWQCKDAIKAVKRRLQHKSSRVQLLTLTLLEAMLKNCG 90

  Fly    79 KPLHLEVASRDFETEFRRLL-AKAQPKVSLKMRQVLKNWAENDYKNDRELDLIPALYAKLRQEGY 142
            ..:|..:|.:....:..:|: .|...:|..|:..:|..|.|       ....:...:........
plant    91 DFVHSHIAEKHLLEDMVKLVRKKGDFEVRNKLLILLDTWNE-------AFSGVACKHPHYNWAYQ 148

  Fly   143 DFKNLGDKTSKTVAEKAAALPKDPNVVSSQQE--------------EDDIAKAIE-LSLKENKGS 192
            :.|..|.|..:...|....|...|.|..|...              ::.:|..|| |||...:..
plant   149 ELKRCGVKFPQRSKEAPLMLEPPPPVTQSSSSSSMNLMSIGSFRRLDETMATEIESLSLSSLESM 213

  Fly   193 PKTGSVASTGTASAYPSLYPSFAGTGSSAPSAEASSAPAPEPRKVRALYDFEAAEENELTFFAGE 257
            .....:.:....:..||                                 .::|.::||      
plant   214 RNVMDLVNDMVQAVNPS---------------------------------DKSALKDEL------ 239

  Fly   258 IIHVLDDSDPNWWKGYNQRGEGLFPSNFVTADLSVDPERLDINQ-------QHKSAA-------- 307
            |:.:::....|..|        |......|||..|....|::|.       :|.:.|        
plant   240 IVDLVEQCRSNQKK--------LIQMLTTTADEDVLARGLELNDSLQVVLARHDAIASGVSLPLL 296

  Fly   308 --AAGQRELDS------AAALQQKTEAAAAAAAAQPVEIDE-----------SKIDRLLHLLHEA 353
              |...||..|      ||||:.....:::::::...|.||           :|...||:.||..
plant   297 LQAPEPRETSSSLKTCGAAALESADSESSSSSSSSESETDEVEDVKDDFIQLAKRHALLNALHSD 361

  Fly   354 NPEDP---SQDSDEMLQLEQEVHQMGPLIDAELERVDRKHAQLTQLSSDLVDAINL--------- 406
            ..|:.   ..|:::..:.|.:..      ..:|...|......|:...|:::.::|         
plant   362 EEEETLLLGNDNEKTAEAEAKTQ------CKDLALFDTTTTTTTKSEQDIIELLSLTLSTTALPS 420

  Fly   407 --------YHTLMRDDRAAAGHFAAAAGGFMPGLAGFPGAALYGAPGYPAAGGFPPA----QNYP 459
                    :.:...||......:..            |.|.....|..|....|.|:    |.:|
plant   421 PQTQPQTQHPSFFADDNILMNSYVV------------PWAQSQEEPQVPKMTQFAPSGPQFQPWP 473

  Fly   460 GMHSMPYG-PVPNPPTSAPSQAPGAPGGYLGQPQGQVPLPYQNGHAAQM---------NSLPAHL 514
            .....||. ..|.|..|.            ||........:..|....|         ||.||..
plant   474 LQQQQPYSYGYPQPQWSG------------GQVNSNDTTFWSQGGNENMVFERNLQVSNSFPARA 526

  Fly   515 TQPTGTAPMPQPIYTQPTPVTTQQQ 539
            |..:|.|          |..|..:|
plant   527 TGTSGAA----------TAATVDRQ 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StamNP_477448.1 VHS_STAM 10..141 CDD:340770 36/127 (28%)
SH3_STAM 235..288 CDD:212754 7/52 (13%)
GAT_STAM 337..413 CDD:410593 16/106 (15%)
PHA03247 <436..526 CDD:223021 24/103 (23%)
AT5G01760NP_195796.2 VHS 22..152 CDD:340765 36/132 (27%)
GAT_GGA-like_plant 213..287 CDD:410579 16/120 (13%)

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